Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 KCNMB3P1-202ENST00000493696 3389 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PARP1P1-201ENST00000413631 3026 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC005618.1-201ENST00000606901 3148 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1091P-201ENST00000363945 107 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-85P-201ENST00000364127 164 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.209-201ENST00000364156 111 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-33P-201ENST00000364249 162 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP76-201ENST00000364419 323 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU4-16P-201ENST00000364737 141 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-91P-201ENST00000364746 163 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CD24P4-201ENST00000382840 243 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-8P-201ENST00000384328 165 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA14B-201ENST00000384452 135 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA66-201ENST00000384792 133 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR518F-201ENST00000384973 87 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC008171.1-201ENST00000395058 200 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP110-201ENST00000410146 285 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP498-201ENST00000411342 120 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 THEM7P-201ENST00000419556 672 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC006457.1-201ENST00000420733 392 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL23AP82-202ENST00000427528 469 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms