Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RPL7AP28-201ENST00000464513 571 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC034236.1-201ENST00000469891 373 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC140059.1-201ENST00000489238 361 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 FTH1P24-201ENST00000503502 462 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC026402.1-201ENST00000513642 170 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC092470.1-201ENST00000546187 132 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL360012.1-201ENST00000602813 131 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AL354718.1-201ENST00000619764 589 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 AC091895.1-201ENST00000624494 256 ntBASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP3BQ96NU0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP3BQ96NU0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP3BQ96NU0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AC083837.1-201ENST00000565297 2994 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 GABPAP-201ENST00000419271 1356 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 SNORD8-201ENST00000363915 110 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.581-201ENST00000391017 97 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 BX842559.1-201ENST00000419615 532 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 RPL12P17-201ENST00000432393 498 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AL596266.1-201ENST00000448132 400 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AL513124.1-201ENST00000450410 614 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 SNORD97-201ENST00000459187 142 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 BX284632.1-201ENST00000478218 541 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 IGLV2-34-201ENST00000490007 283 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 RPL21P129-201ENST00000491732 478 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 COX7A2P2-201ENST00000505291 250 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 NDUFB4P9-201ENST00000511646 388 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 IGLV3-30-201ENST00000524362 298 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 RANP3-201ENST00000530970 276 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 SAMMSON-226ENST00000642089 1582 ntBASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP3BQ96NU0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 SAGE4P-201ENST00000442271 3381 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RLIMP1-201ENST00000339626 1680 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.343-201ENST00000365354 112 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 MIR628-201ENST00000385229 95 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6-918P-201ENST00000391219 106 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 CYP4F30P-202ENST00000420048 405 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RPS12P5-201ENST00000423449 371 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 AL162725.1-201ENST00000435405 301 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RPL35AP22-201ENST00000436855 335 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 SNRPCP3-201ENST00000474888 476 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 PDCD5P2-201ENST00000507570 312 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6-798P-201ENST00000516912 103 ntBASIC5.57□□□□□ -1.52
CNTNAP3BQ96NU0 RNA5SP170-201ENST00000517150 101 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms