Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 MIR1302-1-201ENST00000637932 143 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 OR52H1-202ENST00000641796 1061 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 MTND4P23-201ENST00000447723 1363 ntBASIC4.98□□□□□ -1.61
SHDQ96IW2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.98□□□□□ -1.61
SHDQ96IW2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHDQ96IW2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHDQ96IW2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 RNU4-79P-201ENST00000362764 141 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 RNU6-701P-201ENST00000384059 107 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 NDUFS5P1-201ENST00000405668 289 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 FAT1P1-201ENST00000406588 507 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AL451054.2-201ENST00000420896 202 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC018630.2-202ENST00000422992 927 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC093106.2-201ENST00000428212 385 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 RPL7AP49-201ENST00000429522 581 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AL591438.1-201ENST00000433508 581 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 RPL19P16-201ENST00000433839 588 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.97□□□□□ -1.61
SHDQ96IW2 FABP5P13-201ENST00000452144 328 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 RNU6-329P-201ENST00000459618 107 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.97□□□□□ -1.61
SHDQ96IW2 NARSP2-201ENST00000518524 679 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.97□□□□□ -1.61
SHDQ96IW2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC009852.2-201ENST00000567898 485 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC174048.1-201ENST00000603389 144 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AC104237.2-201ENST00000612456 443 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 SDR42E1P2-201ENST00000614861 481 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 AL357559.1-201ENST00000622228 274 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SHDQ96IW2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AC025031.4-201ENST00000621248 3271 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SHDQ96IW2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHDQ96IW2 PCAT14-202ENST00000627127 3935 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHDQ96IW2 AL391684.1-202ENST00000641293 1636 ntBASIC4.97□□□□□ -1.61
SHDQ96IW2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHDQ96IW2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
SHDQ96IW2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.96□□□□□ -1.62
SHDQ96IW2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SHDQ96IW2 SMIM11P1-201ENST00000369586 178 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 Y_RNA.384-201ENST00000383909 102 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 Y_RNA.431-201ENST00000384086 102 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 RNA5SP187-201ENST00000384400 119 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AL356057.2-201ENST00000403318 432 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 RPL30P2-201ENST00000414021 291 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 RPS23P10-201ENST00000416185 486 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 HSPE1P1-201ENST00000421494 318 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AL732292.1-201ENST00000426692 226 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 KCTD9P3-201ENST00000434597 1169 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 RPS11P1-201ENST00000451072 473 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.96□□□□□ -1.62
SHDQ96IW2 AC109327.1-201ENST00000471666 403 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 VN1R105P-201ENST00000486595 910 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 Y_RNA.654-201ENST00000497848 106 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 VN1R104P-201ENST00000505115 1009 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC015795.1-201ENST00000513669 327 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC112206.3-201ENST00000514578 389 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.96□□□□□ -1.62
SHDQ96IW2 AC133555.2-201ENST00000550213 292 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.96□□□□□ -1.62
SHDQ96IW2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC023575.1-201ENST00000580510 358 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 AC022726.1-201ENST00000587475 207 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.96□□□□□ -1.62
SHDQ96IW2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SHDQ96IW2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SHDQ96IW2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SHDQ96IW2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 AP001350.1-201ENST00000601906 1524 ntBASIC4.96□□□□□ -1.62
SHDQ96IW2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHDQ96IW2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.96□□□□□ -1.62
SHDQ96IW2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.96□□□□□ -1.62
SHDQ96IW2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms