Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 RNA5SP218-201ENST00000363188 109 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC005042.1-201ENST00000393397 800 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 U3.37-201ENST00000408528 213 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 RNA5SP177-201ENST00000410122 107 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC245028.1-201ENST00000423259 256 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 CYP4F34P-201ENST00000425951 481 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC098614.2-201ENST00000426040 255 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AP000705.1-201ENST00000454567 350 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 RN7SL369P-201ENST00000477138 299 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 IGKV1-22-201ENST00000524313 326 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC021231.3-201ENST00000558497 370 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC010463.3-201ENST00000594077 500 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC005070.2-201ENST00000604391 260 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 ARF4P1-201ENST00000605447 541 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AL022345.2-201ENST00000606307 135 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 DDX10P2-201ENST00000417796 2614 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC005332.9-201ENST00000620266 2921 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC110597.1-201ENST00000562669 3176 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC129502.1-201ENST00000623261 1654 ntBASIC6.3□□□□□ -1.4
MS4A3Q96HJ5 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 RNU1-62P-201ENST00000362599 164 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 RNU4-81P-201ENST00000363561 144 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC119751.6-201ENST00000416712 186 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC091390.3-201ENST00000426478 338 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 DBIL5P2-201ENST00000443827 253 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC107297.1-201ENST00000459991 176 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC007215.1-201ENST00000464893 276 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC010531.2-201ENST00000465012 153 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC022137.1-201ENST00000483735 151 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 IGLV1-62-201ENST00000518003 441 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AL160236.1-201ENST00000556317 195 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 FAM91A3P-201ENST00000456826 2544 ntBASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MS4A3Q96HJ5 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 AL589743.1-201ENST00000551932 2712 ntBASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 AC232271.1-201ENST00000602455 2715 ntBASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 RNU6-1249P-201ENST00000363237 111 ntBASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 RNU6-727P-201ENST00000363592 107 ntBASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 SNORA36A-201ENST00000384221 132 ntBASIC6.28□□□□□ -1.4
MS4A3Q96HJ5 RNA5SP176-201ENST00000390956 110 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms