Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RPS26P47-201ENST00000427219 348 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC103987.1-201ENST00000473394 348 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 RPL22P13-201ENST00000493291 347 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 RPL7P23-201ENST00000493874 747 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 NDUFB5P1-201ENST00000508134 564 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 RNU6-475P-201ENST00000516073 104 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC022882.1-201ENST00000532142 501 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC026371.1-201ENST00000551867 419 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC174048.1-201ENST00000603389 144 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 AL512329.2-201ENST00000607350 548 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 AL118522.2-201ENST00000616045 615 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 MIR6719-201ENST00000622428 87 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 AC018445.2-201ENST00000622987 260 ntBASIC5.56□□□□□ -1.52
IFT43Q96FT9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
IFT43Q96FT9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
IFT43Q96FT9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
IFT43Q96FT9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 RNA5SP234-201ENST00000363916 119 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 Y_RNA.552-201ENST00000384665 112 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 SPTLC1P2-201ENST00000407089 121 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 AL591704.1-201ENST00000432574 275 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 AL161722.2-201ENST00000434731 981 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 RPS24P6-201ENST00000452670 400 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 RN7SKP82-201ENST00000516786 223 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 MIR4472-2-201ENST00000582069 67 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 uc_338.7-201ENST00000621834 124 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 AL596275.2-204ENST00000641628 552 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 AL596275.2-206ENST00000641957 626 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
IFT43Q96FT9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
IFT43Q96FT9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IFT43Q96FT9 AC112198.2-201ENST00000426589 6996 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 SNORD62.1-201ENST00000362541 86 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 RNU1-19P-201ENST00000363306 165 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 Y_RNA.380-201ENST00000365663 111 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 USMG5P1-201ENST00000425964 177 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 SNORD5.1-201ENST00000458800 75 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC022493.2-201ENST00000506122 481 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 Y_RNA.689-201ENST00000516589 107 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 RNU6-307P-201ENST00000516743 106 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 SCARNA16.4-201ENST00000516956 187 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC006272.2-201ENST00000594725 163 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC092447.9-201ENST00000603395 144 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AL355297.3-201ENST00000604082 446 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 AL359547.2-201ENST00000615810 418 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC243312.2-201ENST00000623340 601 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 AC073869.8-201ENST00000641806 335 ntBASIC5.54□□□□□ -1.52
IFT43Q96FT9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT43Q96FT9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
IFT43Q96FT9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms