Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC005858.4-201ENST00000623191 700 ntBASIC5.1□□□□□ -1.59
DDX11Q96FC9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX11Q96FC9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
DDX11Q96FC9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DDX11Q96FC9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX11Q96FC9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX11Q96FC9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 EIF2AP4-201ENST00000424793 1781 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX11Q96FC9 NMD3P1-201ENST00000439704 1488 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RNU5E-1-201ENST00000362477 120 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 Y_RNA.157-201ENST00000363638 102 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX11Q96FC9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AL583835.1-201ENST00000399570 407 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 PRRC2CP1-201ENST00000404428 159 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RN7SKP27-201ENST00000410684 333 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RNU2-8P-201ENST00000410727 190 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 RPL23AP38-201ENST00000423801 469 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX11Q96FC9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 SAR1AP4-201ENST00000429225 591 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RPL37P1-201ENST00000432310 284 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC105402.2-201ENST00000438503 358 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC007537.2-201ENST00000472093 511 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC025445.1-201ENST00000502728 300 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 RN7SKP96-201ENST00000516948 297 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RNU6-201P-201ENST00000517100 61 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RNU6-1220P-201ENST00000517126 108 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 PHBP17-201ENST00000528576 541 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 PDCD5P1-201ENST00000543528 309 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC123904.2-201ENST00000548059 300 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC069240.1-201ENST00000548774 375 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 AC037471.2-201ENST00000564941 598 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 MIR5186-201ENST00000577504 120 ntBASIC5.09□□□□□ -1.59
DDX11Q96FC9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX11Q96FC9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
DDX11Q96FC9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
DDX11Q96FC9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
DDX11Q96FC9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
DDX11Q96FC9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC105074.1-201ENST00000623380 3095 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 RPL23AP57-201ENST00000332361 466 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNU1-15P-201ENST00000353977 144 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 MIR383-201ENST00000362257 73 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNA5SP388-201ENST00000362584 119 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 Y_RNA.58-201ENST00000362807 102 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 Y_RNA.154-201ENST00000363624 102 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNU4-1-201ENST00000363925 141 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNU1-132P-201ENST00000364300 164 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNY3P1-201ENST00000365085 102 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNY3-201ENST00000365484 102 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 Y_RNA.490-201ENST00000384413 102 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 SNORD66.1-201ENST00000391230 76 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RPL23AP32-201ENST00000395315 459 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 EIF5P1-201ENST00000400019 1231 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC127391.1-201ENST00000411737 98 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 NIPA2P5-201ENST00000452282 464 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 PPBPP1-201ENST00000510807 373 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RNU6-488P-201ENST00000515918 99 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 RN7SKP82-201ENST00000516786 223 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 AL354984.3-201ENST00000604803 325 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 AL365204.3-201ENST00000612448 685 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 AL133173.2-201ENST00000614270 90 ntBASIC5.08□□□□□ -1.6
DDX11Q96FC9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms