Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.24□□□□□ -1.89
PTP4A1Q93096 AP000553.6-201ENST00000641242 118 ntBASIC3.24□□□□□ -1.89
PTP4A1Q93096 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PTP4A1Q93096 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTP4A1Q93096 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AL049641.1-201ENST00000441055 1948 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 RN7SKP280-201ENST00000364196 304 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 SNORA73.2-201ENST00000364946 201 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTP4A1Q93096 U3.39-201ENST00000408569 239 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTP4A1Q93096 RN7SKP156-201ENST00000410308 342 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 RNU6-584P-201ENST00000410350 95 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 MTCO1P17-201ENST00000411522 491 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 ELOCP9-201ENST00000418624 239 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC006960.1-201ENST00000419980 153 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 TRIM60P18-201ENST00000441518 828 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC021146.8-201ENST00000507455 733 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 TPT1P8-201ENST00000510120 555 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AMZ2P1-203ENST00000565833 850 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 RN7SL703P-201ENST00000578485 302 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 BNIP3P38-201ENST00000601117 544 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AL158042.1-201ENST00000605338 460 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC013470.4-201ENST00000619978 986 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC019226.1-201ENST00000625666 515 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC006927.4-201ENST00000639187 543 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
PTP4A1Q93096 AC007785.2-201ENST00000598627 1916 ntBASIC3.23□□□□□ -1.89
PTP4A1Q93096 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 SNORA4.1-201ENST00000364263 144 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 SNORA23-201ENST00000365128 182 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AP002088.1-201ENST00000382740 395 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RNU6-741P-201ENST00000383889 107 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RNU6-198P-201ENST00000384258 104 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RNU6-1035P-201ENST00000384477 107 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC025750.1-201ENST00000399891 379 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AL590084.2-201ENST00000401481 382 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RPL36AP36-201ENST00000418616 301 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AL390023.1-201ENST00000428836 262 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 EEF1E1P1-201ENST00000446998 430 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC125238.1-201ENST00000448842 249 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AL009048.1-201ENST00000450437 298 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RPL23AP35-201ENST00000451906 501 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC020893.1-201ENST00000502452 580 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC093809.1-201ENST00000509155 340 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 MTND4LP31-201ENST00000514859 294 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 RNU2-27P-201ENST00000516185 142 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AP000926.4-201ENST00000527351 454 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC004024.1-201ENST00000549244 247 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AL357094.1-201ENST00000603845 844 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
PTP4A1Q93096 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PTP4A1Q93096 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTP4A1Q93096 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.89
PTP4A1Q93096 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTP4A1Q93096 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
PTP4A1Q93096 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms