Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 ARL4AP2-201ENST00000507378 601 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 RNU6-488P-201ENST00000515918 99 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 SNORA76.2-201ENST00000517095 137 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC004217.3-201ENST00000551552 878 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC012254.4-201ENST00000588843 273 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 VN1R88P-201ENST00000596787 292 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC009220.3-201ENST00000604318 586 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 BX664608.1-201ENST00000610519 487 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 TUG1_1.1-201ENST00000610654 145 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC002076.2-201ENST00000617362 122 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC073569.3-201ENST00000619055 682 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC092650.2-201ENST00000619984 902 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL118508.4-201ENST00000624142 1176 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AL109659.3-201ENST00000624985 950 ntBASIC2.34□□□□□ -2.03
LMX1AQ8TE12 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.34□□□□□ -2.03
LMX1AQ8TE12 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
LMX1AQ8TE12 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LMX1AQ8TE12 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
LMX1AQ8TE12 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LMX1AQ8TE12 AC025263.3-201ENST00000622965 1396 ntBASIC2.34□□□□□ -2.04
LMX1AQ8TE12 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LMX1AQ8TE12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 RNU6-374P-201ENST00000364146 108 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 SSXP10-201ENST00000402595 565 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 MTND3P20-201ENST00000407663 186 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AL096701.2-201ENST00000416920 238 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 ATG3P1-201ENST00000419507 911 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 MTATP6P4-201ENST00000427725 675 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 GSTA11P-201ENST00000452866 669 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 snoU13.4-201ENST00000458916 104 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 RPS23P3-201ENST00000470993 430 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 RPL36AP51-201ENST00000487216 318 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC098799.2-201ENST00000509466 868 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 SNORA31.1-201ENST00000515993 133 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 SNORA31.5-201ENST00000516190 133 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC092470.1-201ENST00000546187 132 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 OR7K1P-201ENST00000546439 926 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 SETP2-201ENST00000553886 926 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AL355812.1-201ENST00000603215 216 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC096586.1-201ENST00000610267 561 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC018755.4-201ENST00000619715 454 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC006249.1-201ENST00000621223 471 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 CRYM-AS1-204ENST00000637983 556 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AC008432.1-201ENST00000615912 1320 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 AP002907.1-201ENST00000606361 1430 ntBASIC2.33□□□□□ -2.04
LMX1AQ8TE12 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1AQ8TE12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 SNORA14A-201ENST00000364773 135 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 RNU6-339P-201ENST00000384310 107 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MIR504-201ENST00000385065 83 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MT-TC-201ENST00000387405 66 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 BTF3P7-201ENST00000407097 488 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 RNU6-272P-201ENST00000411028 104 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AC107081.1-201ENST00000414975 361 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AL357078.2-201ENST00000416486 427 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MTCO3P12-201ENST00000416718 547 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 DPH3P2-201ENST00000422618 250 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 RPL36P19-201ENST00000430744 301 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MUPP-201ENST00000438111 566 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 ST13P20-201ENST00000447996 1065 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 BX248409.1-201ENST00000455497 255 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 GAPDHP39-201ENST00000481866 979 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 RPL9P33-201ENST00000484311 566 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 KLHL2P1-201ENST00000508691 521 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AC026412.2-201ENST00000512270 1075 ntBASIC2.32□□□□□ -2.04
LMX1AQ8TE12 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.32□□□□□ -2.04
LMX1AQ8TE12 DNAJC8P1-201ENST00000554535 372 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms