Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTL9Q8NET4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTL9Q8NET4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 RNU6-666P-201ENST00000363499 107 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.55□□□□□ -2
RTL9Q8NET4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL9Q8NET4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL9Q8NET4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.55□□□□□ -2
RTL9Q8NET4 RPL21P66-201ENST00000426566 466 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 AC129850.1-201ENST00000436203 508 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 OR6C72P-201ENST00000451403 892 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.55□□□□□ -2
RTL9Q8NET4 TTC39CP1-201ENST00000512513 755 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL9Q8NET4 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.55□□□□□ -2
RTL9Q8NET4 AC120053.1-201ENST00000607706 736 ntBASIC2.55□□□□□ -2
RTL9Q8NET4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.55□□□□□ -2
RTL9Q8NET4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RTL9Q8NET4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 RNU6-1251P-201ENST00000364502 107 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 SNORD65-201ENST00000391079 73 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 AL356057.2-201ENST00000403318 432 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 RNA5SP247-201ENST00000411181 105 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 AC244098.2-201ENST00000422068 99 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.54□□□□□ -2
RTL9Q8NET4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.54□□□□□ -2
RTL9Q8NET4 MTCYBP14-201ENST00000457471 715 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.54□□□□□ -2
RTL9Q8NET4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.54□□□□□ -2
RTL9Q8NET4 AC091917.2-201ENST00000505002 744 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 RPL37P25-201ENST00000507308 276 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.54□□□□□ -2
RTL9Q8NET4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.54□□□□□ -2
RTL9Q8NET4 AC090616.5-202ENST00000582111 297 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.54□□□□□ -2
RTL9Q8NET4 AC002064.3-201ENST00000623448 346 ntBASIC2.54□□□□□ -2
RTL9Q8NET4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTL9Q8NET4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.53□□□□□ -2
RTL9Q8NET4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTL9Q8NET4 SNORA14A-201ENST00000364773 135 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTL9Q8NET4 U3.37-201ENST00000408528 213 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 CR769767.1-201ENST00000436337 346 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 AL031663.1-201ENST00000437445 219 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 RPL7P54-201ENST00000438336 674 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 AC009237.8-201ENST00000445492 379 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 RPS29P12-201ENST00000460178 152 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 AC008083.2-201ENST00000546707 476 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.53□□□□□ -2
RTL9Q8NET4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.53□□□□□ -2
RTL9Q8NET4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTL9Q8NET4 AP001004.1-201ENST00000582468 324 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 RPL23AP78-201ENST00000599928 470 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 AC016727.1-205ENST00000605437 569 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 AC055764.2-201ENST00000610089 670 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
RTL9Q8NET4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.53□□□□□ -2
RTL9Q8NET4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RTL9Q8NET4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTL9Q8NET4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
RTL9Q8NET4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTL9Q8NET4 AL138880.1-201ENST00000405824 642 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 HSFY3P-201ENST00000444242 1191 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AL591719.1-201ENST00000444669 744 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 TPMTP4-201ENST00000450749 678 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AP000926.3-201ENST00000497201 299 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AC010625.1-201ENST00000511296 403 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 AMZ2P1-203ENST00000565833 850 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 AC015726.3-201ENST00000624501 418 ntBASIC2.52□□□□□ -2.01
RTL9Q8NET4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
RTL9Q8NET4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RTL9Q8NET4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTL9Q8NET4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 SNORA17.3-201ENST00000391159 129 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTL9Q8NET4 AL591034.1-201ENST00000407447 340 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.51□□□□□ -2.01
RTL9Q8NET4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.51□□□□□ -2.01
RTL9Q8NET4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL9Q8NET4 RPS26P56-201ENST00000444468 240 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 ARL5AP2-201ENST00000444698 533 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL9Q8NET4 MTCO3P35-201ENST00000485582 781 ntBASIC2.51□□□□□ -2.01
RTL9Q8NET4 OR52A4P-203ENST00000498233 1014 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms