Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 U73023.1-201ENST00000603134 700 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AL161734.1-201ENST00000609720 557 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 BX649567.1-201ENST00000642071 1134 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC244517.1-201ENST00000606030 2086 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 RNU6-1226P-201ENST00000384317 107 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC006548.1-201ENST00000427470 102 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC004865.1-201ENST00000442276 1003 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AL034418.1-201ENST00000448675 860 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC108938.1-201ENST00000451204 136 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC233982.1-201ENST00000451247 436 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC010625.1-201ENST00000511296 403 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 RNU6-760P-201ENST00000516078 97 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 SNRPGP16-201ENST00000533275 226 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 CR589904.2-201ENST00000612533 440 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 CR381572.1-201ENST00000625098 102 ntBASIC2.62□□□□□ -1.99
CCDC112Q8NEF3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 SNORA27.3-201ENST00000364937 134 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 VTA1P1-201ENST00000414044 866 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC114973.1-201ENST00000429057 632 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 MTCYBP34-201ENST00000439552 670 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPL7P36-201ENST00000444633 681 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPL36AP51-201ENST00000487216 318 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC023424.2-201ENST00000493479 777 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 GTF2IP9-201ENST00000502460 301 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 MTND3P24-201ENST00000506306 329 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC008885.2-201ENST00000509506 930 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 IGLV3-17-201ENST00000519099 244 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC025281.1-201ENST00000567026 265 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 ATP5F1P7-201ENST00000567330 760 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 RPL23AP84-201ENST00000571193 464 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 ISCA1P3-201ENST00000577104 373 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC008739.2-201ENST00000597006 317 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC112Q8NEF3 AC093536.2-201ENST00000565257 1406 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 RNU6-40P-201ENST00000384254 107 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 SSXP10-201ENST00000402595 565 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 MTND1P23-201ENST00000416931 372 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AL137014.1-201ENST00000420490 1226 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC135721.1-201ENST00000497954 479 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 NAMPTP2-201ENST00000505629 1115 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AP001646.1-201ENST00000527936 915 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms