Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC004925.1-201ENST00000624256 2706 ntBASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC33Q8N5R6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 U8.3-201ENST00000363321 132 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 PTMAP2-201ENST00000397627 327 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 SSXP9-201ENST00000417503 292 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC009961.2-201ENST00000435771 251 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 VN1R34P-201ENST00000447387 883 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 NPM1P49-201ENST00000448027 714 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 GAPDHP17-201ENST00000449858 1001 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 HMGB3P22-202ENST00000451823 572 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC010285.1-201ENST00000470580 392 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC110792.1-201ENST00000491826 472 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 RPL7P24-201ENST00000493052 752 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 NDUFB4P2-201ENST00000509515 391 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 Y_RNA.672-201ENST00000516289 104 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 MTND1P15-201ENST00000579262 949 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC121334.2-201ENST00000605387 271 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 Z99129.1-201ENST00000612510 255 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC112204.3-201ENST00000623822 332 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC106871.1-201ENST00000568324 3102 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 FARSBP1-201ENST00000435808 1778 ntBASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC33Q8N5R6 AC116667.1-201ENST00000604855 2072 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 GNG5P1-201ENST00000255500 204 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 SNORD35B-201ENST00000363660 87 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU6-1074P-201ENST00000383995 104 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU6-637P-201ENST00000384050 107 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU2-43P-201ENST00000410306 190 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU2-66P-201ENST00000410650 161 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RAC1P3-201ENST00000416129 580 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL589872.1-201ENST00000426602 288 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 GOT2P5-201ENST00000433995 546 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC234775.1-201ENST00000454247 670 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 snoU13.24-201ENST00000458998 104 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 MTND1P3-201ENST00000484956 952 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC114967.1-201ENST00000504890 259 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 MTND2P33-201ENST00000506452 1031 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 CDC42P4-201ENST00000510507 563 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNA5SP309-201ENST00000516670 106 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 SNORA18.6-201ENST00000516792 115 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU6-798P-201ENST00000516912 103 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 RNU2-46P-201ENST00000517038 113 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC107934.1-201ENST00000522215 217 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC120057.2-201ENST00000571520 271 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 COX6CP3-201ENST00000580869 223 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 MIR3682-201ENST00000581338 84 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 MIR3118-1-201ENST00000581787 76 ntBASIC4.23□□□□□ -1.73
CCDC33Q8N5R6 SNORD84-203ENST00000584275 78 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms