Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC068714.1-201ENST00000559623 800 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 AC120057.2-201ENST00000571520 271 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 BX664608.1-201ENST00000610519 487 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 AL354798.1-201ENST00000622505 329 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 AC007546.2-201ENST00000623996 360 ntBASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SLC44A3Q8N4M1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL157700.1-201ENST00000561973 1432 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 FRG1BP-201ENST00000278882 761 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 FRG1CP-201ENST00000358464 769 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNA5SP119-201ENST00000362715 117 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-744P-201ENST00000365557 107 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 SNORA51.6-201ENST00000384151 125 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-1316P-201ENST00000384242 108 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-441P-201ENST00000384545 106 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 MIR649-201ENST00000384843 97 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 SNORD96B-201ENST00000386148 79 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC068050.1-201ENST00000394891 380 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL121834.1-202ENST00000404494 277 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 BTBD10P2-201ENST00000404779 676 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL133384.1-201ENST00000412744 351 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 VDAC1P9-201ENST00000412766 841 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 PDCL2P1-201ENST00000419302 352 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL035410.1-201ENST00000427409 427 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC005008.1-201ENST00000456151 612 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-1218P-201ENST00000458990 108 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC023194.1-201ENST00000493084 308 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RPS4XP18-201ENST00000495480 763 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC018797.3-201ENST00000513388 1241 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 Vault.3-201ENST00000516676 95 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RN7SKP96-201ENST00000516948 297 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RNU6-714P-201ENST00000516963 103 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AP003072.2-201ENST00000527756 676 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC055876.1-202ENST00000567053 138 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL161756.2-201ENST00000604597 246 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 HSPE1P14-201ENST00000605812 302 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL442067.2-201ENST00000614033 363 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC068722.2-201ENST00000618734 544 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 FRG1KP-201ENST00000623592 341 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC138649.5-201ENST00000637456 137 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 AC092079.1-201ENST00000558620 1985 ntBASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A3Q8N4M1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MAPK10-304ENST00000641341 3984 ntBASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A3Q8N4M1 MIR195-201ENST00000385194 87 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms