Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 VN1R36P-201ENST00000414936 291 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 RPS12P23-201ENST00000419579 400 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 SDCBPP3-201ENST00000419629 891 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC092832.1-201ENST00000422934 400 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RPL30P3-201ENST00000424262 333 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.64□□□□□ -1.83
USP43Q70EL4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 SNORD42A-201ENST00000459584 64 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC096576.1-201ENST00000489014 359 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC108078.3-201ENST00000502633 489 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC048346.1-201ENST00000510247 144 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.64□□□□□ -1.83
USP43Q70EL4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RNY4P37-201ENST00000516225 96 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.64□□□□□ -1.83
USP43Q70EL4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 HPRT1P3-201ENST00000539521 576 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 OR8R1P-201ENST00000543943 764 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AL161713.1-201ENST00000555538 145 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC136618.2-201ENST00000575091 400 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AP001004.1-201ENST00000582468 324 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC008752.3-201ENST00000588113 712 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.64□□□□□ -1.83
USP43Q70EL4 AC060780.3-201ENST00000589464 80 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL360085.1-201ENST00000604713 532 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL365204.3-201ENST00000612448 685 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC005332.6-201ENST00000613178 446 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AL591424.2-201ENST00000617023 128 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 AC120349.2-201ENST00000625002 298 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.64□□□□□ -1.83
USP43Q70EL4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
USP43Q70EL4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP43Q70EL4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
USP43Q70EL4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 Y_RNA.279-201ENST00000364763 95 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 RNU6-534P-201ENST00000364877 106 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AL359837.1-201ENST00000381357 287 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 MIR134-201ENST00000385258 73 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 RNU6-780P-201ENST00000391030 104 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 RPL17P12-201ENST00000413391 526 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC009237.2-201ENST00000421358 284 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC073464.1-201ENST00000429823 534 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 MTCYBP45-201ENST00000435243 565 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 SKP1P1-201ENST00000438081 489 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 RPS4XP4-201ENST00000443195 763 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 PSPHP1-201ENST00000450062 261 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC019235.1-201ENST00000503847 207 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 RNU6-1045P-201ENST00000516321 107 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
USP43Q70EL4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.63□□□□□ -1.83
USP43Q70EL4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
USP43Q70EL4 PSMA3P-201ENST00000555485 635 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AL391840.1-201ENST00000571144 367 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 MIR4795-201ENST00000584182 89 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 SEPT7P9-203ENST00000604116 343 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC106900.2-201ENST00000604994 317 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 AC107214.2-201ENST00000608204 634 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 AL020991.1-201ENST00000612314 373 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 AC040896.1-201ENST00000613819 479 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 uc_338.13-201ENST00000618243 179 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms