Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 ELOCP34-201ENST00000604436 327 ntBASIC2.21□□□□□ -2.06
UBR3Q6ZT12 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.21□□□□□ -2.06
UBR3Q6ZT12 DCAF13P1-201ENST00000495256 1330 ntBASIC2.21□□□□□ -2.06
UBR3Q6ZT12 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RNU6-392P-201ENST00000364926 101 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RAD23BP2-201ENST00000416003 1207 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC234782.4-201ENST00000417646 1048 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 MTND4LP22-201ENST00000508209 276 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 PTP4A1P6-201ENST00000531034 478 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RPL23AP78-201ENST00000599928 470 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 MIR502-201ENST00000606349 86 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 uc_338.5-201ENST00000611839 155 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RNA5SP167-201ENST00000365461 116 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 MIR591-201ENST00000385290 95 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RNU6-603P-201ENST00000411403 107 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 HIGD1AP11-201ENST00000438361 280 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 MTCO1P30-201ENST00000515244 580 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC103987.3-201ENST00000582071 292 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AC131280.1-202ENST00000624067 4211 ntBASIC2.2□□□□□ -2.06
UBR3Q6ZT12 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UBR3Q6ZT12 AL118496.1-201ENST00000440201 1812 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AC007256.1-201ENST00000392253 2765 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AC090453.1-201ENST00000495560 436 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AC090953.1-201ENST00000604305 1092 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 AL645939.4-201ENST00000604495 135 ntBASIC2.19□□□□□ -2.06
UBR3Q6ZT12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 RNU4-74P-201ENST00000411280 161 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 USP9YP15-201ENST00000442391 422 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC012181.1-201ENST00000479895 423 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC104986.1-201ENST00000517978 436 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC092954.1-201ENST00000609121 445 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 MTND4LP13-201ENST00000425022 298 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 RPL7P37-201ENST00000425095 738 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 HMGB1P27-201ENST00000431429 603 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AL645568.3-201ENST00000433683 316 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AL590664.1-201ENST00000448065 339 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC098799.2-201ENST00000509466 868 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.18□□□□□ -2.06
UBR3Q6ZT12 AC016877.3-201ENST00000606778 504 ntBASIC2.18□□□□□ -2.06
UBR3Q6ZT12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 U3.15-201ENST00000365398 212 ntBASIC2.17□□□□□ -2.06
UBR3Q6ZT12 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 AC005517.2-201ENST00000424673 553 ntBASIC2.17□□□□□ -2.06
UBR3Q6ZT12 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 DUXAP3-201ENST00000603616 594 ntBASIC2.17□□□□□ -2.06
UBR3Q6ZT12 KATNBL1P1-201ENST00000605192 748 ntBASIC2.17□□□□□ -2.06
UBR3Q6ZT12 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UBR3Q6ZT12 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBR3Q6ZT12 RNU4-13P-201ENST00000364019 141 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 RSL24D1P2-201ENST00000445584 366 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC093392.2-201ENST00000450682 337 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC092798.1-201ENST00000458542 409 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 SNORD108-201ENST00000459332 71 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 METTL21EP-201ENST00000298105 713 ntBASIC2.16□□□□□ -2.06
UBR3Q6ZT12 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms