Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AL021397.1-201ENST00000451806 248 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AL442163.2-201ENST00000553912 710 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 VN1R78P-201ENST00000597393 564 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 RNU6-666P-201ENST00000363499 107 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MORF4L1P7-201ENST00000426038 703 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MTND3P24-201ENST00000506306 329 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 IGKV2-36-201ENST00000519999 223 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 AC103710.1-201ENST00000610003 901 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 AC055764.2-201ENST00000610089 670 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 NF1P10-201ENST00000613227 742 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MIR7843-201ENST00000622274 79 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MTND4P35-201ENST00000604257 1375 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 AP006437.1-201ENST00000641440 3685 ntBASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC171Q6TFL3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
CCDC171Q6TFL3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 OR56A5-201ENST00000340110 738 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 SNORD114-1-201ENST00000362705 72 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 RNA5SP138-201ENST00000365098 114 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 Z75741.2-201ENST00000417272 1167 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 TOMM22P1-201ENST00000418578 312 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 RNA5SP468-201ENST00000516782 93 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AC120053.1-201ENST00000607706 736 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 AC245517.5-201ENST00000611529 162 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 MIR6864-201ENST00000617935 70 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 MIR219B-201ENST00000637023 88 ntBASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC171Q6TFL3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AL512646.1-201ENST00000269395 1077 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RNU4-52P-201ENST00000384209 138 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RNU2-2P-201ENST00000410396 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RPL23AP23-201ENST00000452590 471 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RN7SKP277-201ENST00000516895 283 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC025755.1-201ENST00000521306 278 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC090312.2-201ENST00000582687 378 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC115085.1-201ENST00000588924 229 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.15-201ENST00000611544 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.16-201ENST00000613119 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.12-201ENST00000613778 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.20-201ENST00000613956 192 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.9-201ENST00000615427 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.11-201ENST00000616345 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC015726.3-201ENST00000624501 418 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 AC099654.7-201ENST00000635788 2127 ntBASIC2.45□□□□□ -2.02
CCDC171Q6TFL3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC171Q6TFL3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC171Q6TFL3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC171Q6TFL3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC171Q6TFL3 AL079342.1-201ENST00000401460 267 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms