Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC083843.3-201ENST00000623679 2186 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC104118.1-201ENST00000607625 1589 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 RNA5SP122-201ENST00000384457 108 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 RNU6-45P-201ENST00000384471 107 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL590704.1-201ENST00000402856 794 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 SNORA11.3-201ENST00000408471 128 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 OR2AT2P-201ENST00000413438 905 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL645568.3-201ENST00000433683 316 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 RPL29P29-201ENST00000448725 423 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 CYCSP34-201ENST00000458172 304 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 HMGB1P30-201ENST00000492455 606 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 RN7SL101P-201ENST00000496350 279 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 RN7SKP258-201ENST00000517151 304 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 NRBF2P4-201ENST00000520874 850 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC025423.5-201ENST00000550230 219 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL049872.1-201ENST00000556323 322 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 MIR3614-201ENST00000581261 86 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC233702.9-201ENST00000581528 203 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 SNORA11.6-201ENST00000619030 128 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 AC127024.6-201ENST00000621598 424 ntBASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN4Q6PJG9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 MAPK10-349ENST00000641767 3661 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC005592.1-201ENST00000566527 1640 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AL158163.1-201ENST00000603915 1649 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RNU6-14P-201ENST00000384630 106 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 Y_RNA.574-201ENST00000384766 95 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RNU6-712P-201ENST00000410558 100 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 SDHDP6-201ENST00000414693 480 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AL138785.1-201ENST00000425821 331 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RPS29P14-201ENST00000431518 171 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC007686.1-201ENST00000488511 463 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC026979.1-201ENST00000492525 396 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 CEACAMP10-202ENST00000495431 496 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RPS27AP13-201ENST00000498403 237 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC022493.2-201ENST00000506122 481 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC091912.1-201ENST00000511351 248 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AP005403.1-201ENST00000579720 229 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC113195.1-201ENST00000579952 141 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 MIR7853-201ENST00000584820 132 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC011494.1-201ENST00000596454 237 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 AC011373.1-201ENST00000607270 237 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 RN7SL787P-201ENST00000613000 284 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 uc_338.7-201ENST00000621834 124 ntBASIC4.87□□□□□ -1.63
LRFN4Q6PJG9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms