Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNA5SP46-201ENST00000362370 120 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RNU1-19P-201ENST00000363306 165 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.200-201ENST00000364018 102 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RNU6-378P-201ENST00000384324 107 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RNU6-1081P-201ENST00000384537 107 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 MIR105-2-201ENST00000385083 81 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AL138885.1-201ENST00000405921 675 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 HMGN1P24-201ENST00000412282 298 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RPL23AP25-201ENST00000430973 463 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RPL23AP69-201ENST00000431134 458 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 CEACAMP9-201ENST00000442990 513 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC090804.1-201ENST00000448870 490 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.644-201ENST00000459006 113 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AL133445.1-201ENST00000467051 452 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 ATP5LP5-201ENST00000483050 299 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AP001086.1-201ENST00000494882 321 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC098976.1-201ENST00000513014 541 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.674-201ENST00000516362 113 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 RN7SKP96-201ENST00000516948 297 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC100784.1-201ENST00000522790 310 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 MIR1269B-201ENST00000580405 75 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AL138825.1-201ENST00000618587 192 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 MIR6730-201ENST00000622213 67 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC138393.1-203ENST00000327086 343 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RNA5SP132-201ENST00000364725 118 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RNU6-393P-201ENST00000384475 107 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.577-201ENST00000384794 101 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC016739.1-201ENST00000405359 345 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 MRPL53P1-201ENST00000414323 319 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AL360081.1-201ENST00000428299 555 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 NEFMP1-201ENST00000443423 1006 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RPS3AP46-201ENST00000448352 682 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RNU7-59P-201ENST00000459101 61 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC104164.1-201ENST00000460282 590 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RPS29P26-201ENST00000477483 171 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 BX510359.5-201ENST00000515651 304 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RNU4-71P-201ENST00000516258 113 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RNA5SP34-201ENST00000516887 130 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC109329.1-201ENST00000518744 317 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 IGLV3-30-201ENST00000524362 298 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC087441.2-201ENST00000529141 262 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC044860.2-201ENST00000561005 179 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 MIR4293-201ENST00000584305 78 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC012669.1-201ENST00000603209 283 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 RPL23AP92-201ENST00000603609 255 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 AC073869.10-201ENST00000642016 354 ntBASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXR1Q6PIV2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 AC130650.2-201ENST00000618736 2403 ntBASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXR1Q6PIV2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms