Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC093424.1-201ENST00000604999 338 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AL513477.2-201ENST00000607858 568 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AL162274.2-201ENST00000614406 332 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AC008083.4-201ENST00000615076 444 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AC109809.1-201ENST00000619665 545 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AL590240.3-201ENST00000621416 943 ntBASIC3.69□□□□□ -1.82
CTR9Q6PD62 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.69□□□□□ -1.82
CTR9Q6PD62 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTR9Q6PD62 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTR9Q6PD62 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 RPL23AP57-201ENST00000332361 466 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 RNU6-525P-201ENST00000363685 104 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 SNORA51.6-201ENST00000384151 125 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 SNORD67-201ENST00000390833 111 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 RNU1-101P-201ENST00000391171 127 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 RN7SKP220-201ENST00000410611 288 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 HIGD1AP15-201ENST00000416198 280 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 PSMA2P3-201ENST00000429685 675 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 RPL23AP33-201ENST00000442301 452 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 RSL24D1P3-201ENST00000449255 495 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 TRBV26-201ENST00000456572 344 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC116353.3-201ENST00000511215 249 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 IGKV2D-36-201ENST00000518643 226 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC023050.2-201ENST00000544968 387 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 AL109653.1-201ENST00000603091 248 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC025588.2-201ENST00000604851 466 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 MTND5P19-201ENST00000424872 1794 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC004925.1-201ENST00000624256 2706 ntBASIC3.68□□□□□ -1.82
CTR9Q6PD62 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CTR9Q6PD62 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTR9Q6PD62 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 RNU6-621P-201ENST00000364752 109 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC110754.1-201ENST00000399740 601 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 CKS1BP5-201ENST00000434172 273 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 RPL7P52-201ENST00000449200 742 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC011825.1-201ENST00000484967 388 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 OR4G11P-201ENST00000492842 939 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC021146.8-201ENST00000507455 733 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 HMGB1P28-201ENST00000507778 552 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 LARP7P2-201ENST00000575306 125 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC069304.2-201ENST00000605154 435 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AL160281.1-201ENST00000605307 311 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC131235.4-201ENST00000609288 620 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 ATP5A1P2-202ENST00000616464 443 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 AC084035.1-201ENST00000634543 607 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 CDR1-202ENST00000625883 1485 ntBASIC3.67□□□□□ -1.82
CTR9Q6PD62 PABPC1P7-201ENST00000413177 1513 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTR9Q6PD62 AP000776.1-201ENST00000530032 1663 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 SNRPEP3-201ENST00000338402 276 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 SNORA26.7-201ENST00000391288 122 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 ARF4P3-201ENST00000397387 509 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 AL138885.1-201ENST00000405921 675 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.66□□□□□ -1.82
CTR9Q6PD62 AL008987.1-201ENST00000415528 237 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.66□□□□□ -1.82
CTR9Q6PD62 OFD1P18Y-201ENST00000420889 959 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.66□□□□□ -1.82
CTR9Q6PD62 AC005517.2-201ENST00000424673 553 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.66□□□□□ -1.82
CTR9Q6PD62 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
CTR9Q6PD62 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms