Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AL359385.1-201ENST00000456509 365 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC078785.3-201ENST00000476607 425 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 PARP4P3-201ENST00000510265 317 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 GMPSP1-201ENST00000514075 579 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-840P-201ENST00000517275 65 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC022616.3-201ENST00000523940 148 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 MIR4737-201ENST00000583979 81 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AF038458.1-201ENST00000588406 262 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL022154.1-201ENST00000604698 785 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL021997.1-201ENST00000605757 193 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RN7SKP226-201ENST00000364912 300 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-259P-201ENST00000383999 107 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RNA5SP107-201ENST00000411358 122 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL591848.1-201ENST00000413092 322 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 MTCO1P21-201ENST00000416634 589 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 USP9YP9-201ENST00000429406 715 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL356867.1-201ENST00000429623 299 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL358934.1-201ENST00000432346 324 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RPS5P7-201ENST00000456664 608 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 MTCO2P29-201ENST00000465212 189 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL049874.1-201ENST00000489560 388 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC139783.2-201ENST00000504847 1145 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC123904.3-201ENST00000547218 814 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 RPL23AP84-201ENST00000571193 464 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC012417.1-201ENST00000582307 1039 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 NRBF2P1-201ENST00000587407 859 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC004492.1-201ENST00000607036 742 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC103710.3-201ENST00000608157 948 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC009570.1-201ENST00000609599 745 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC006338.1-201ENST00000618453 749 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AC068880.5-201ENST00000624331 290 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 OR4G2P-202ENST00000641004 1759 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 AL136164.4-201ENST00000625013 2135 ntBASIC4.27□□□□□ -1.73
PPP4R4Q6NUP7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MRPL42P2-201ENST00000403169 426 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 RSU1P3-201ENST00000412878 835 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms