Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 HMGB1P5-201ENST00000255320 642 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 RNU6-492P-201ENST00000363035 104 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 MIR670-201ENST00000390142 98 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 ARF4P3-201ENST00000397387 509 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC233728.2-201ENST00000425348 757 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 SAR1AP4-201ENST00000429225 591 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC112220.1-201ENST00000434628 355 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 MTCO1P48-201ENST00000448024 1096 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AL358232.1-201ENST00000448030 501 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AL445669.2-201ENST00000454425 421 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AP001992.1-205ENST00000462248 379 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC104472.2-201ENST00000469035 601 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 RPS23P3-201ENST00000470993 430 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC104982.1-201ENST00000478775 574 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC118942.1-201ENST00000529674 1035 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC090502.2-201ENST00000549267 280 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AL445435.1-201ENST00000604232 665 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC018645.2-201ENST00000609151 472 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 RNU6-1192P-201ENST00000612197 107 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC008083.4-201ENST00000615076 444 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 RNU6-489P-201ENST00000618289 107 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC091046.2-201ENST00000620775 665 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATL3Q6DD88 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATL3Q6DD88 AC109315.1-201ENST00000584143 1347 ntBASIC3.12□□□□□ -1.91
ATL3Q6DD88 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 ZNF807-201ENST00000328088 1707 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATL3Q6DD88 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATL3Q6DD88 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 SNORD65.1-201ENST00000390889 71 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 RNU6-1300P-201ENST00000391046 108 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 U3.29-201ENST00000391296 212 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 MTND4P3-201ENST00000417829 541 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 GTF2IP7-202ENST00000436677 309 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC093155.1-201ENST00000440164 826 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC079776.3-201ENST00000450665 370 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 HMGB1P25-201ENST00000468402 607 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC017015.1-201ENST00000477387 286 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC126182.1-201ENST00000478134 357 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC111000.2-201ENST00000507775 550 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 KLHL2P1-201ENST00000508691 521 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC026412.2-201ENST00000512270 1075 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AL022067.1-201ENST00000602426 454 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AF129408.1-201ENST00000608767 431 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC109454.4-201ENST00000623411 649 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC104985.3-201ENST00000623479 597 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC040168.1-201ENST00000623594 991 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 AC090897.3-201ENST00000636973 1157 ntBASIC3.11□□□□□ -1.91
ATL3Q6DD88 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.11□□□□□ -1.91
ATL3Q6DD88 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 RNU6-1074P-201ENST00000383995 104 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 RNA5SP21-201ENST00000410917 96 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 EEF1A1P41-201ENST00000414667 207 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 RPL7P10-201ENST00000417407 739 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 ATG3P1-201ENST00000419507 911 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.1□□□□□ -1.91
ATL3Q6DD88 AL590639.1-201ENST00000456484 337 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 BX510359.1-201ENST00000456973 237 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATL3Q6DD88 MLLT10P2-201ENST00000506434 249 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 SNORA74D-201ENST00000516404 141 ntBASIC3.1□□□□□ -1.91
ATL3Q6DD88 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms