Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 DDX10P1-201ENST00000448545 1933 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 MAPK10-372ENST00000641954 3413 ntBASIC4.11□□□□□ -1.75
CCDC38Q502W7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC38Q502W7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 USP9YP13-201ENST00000417797 480 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 ST13P20-201ENST00000447996 1065 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 DNAJC19P1-201ENST00000455312 319 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC108860.1-201ENST00000484521 383 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC114967.1-201ENST00000504890 259 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC004067.1-201ENST00000608733 700 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC090425.2-201ENST00000608818 501 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 MIR7151-201ENST00000617477 60 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC010149.2-201ENST00000637608 315 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC38Q502W7 AL353746.1-201ENST00000566293 6881 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC38Q502W7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 AC092326.2-201ENST00000624772 1561 ntBASIC4.1□□□□□ -1.75
CCDC38Q502W7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 SNORA60-201ENST00000362396 134 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 DEFB109C-201ENST00000382575 264 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 DEFB109B-201ENST00000382656 264 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 OR6C69P-201ENST00000394268 893 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPL21P32-201ENST00000419877 477 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 CYCSP43-201ENST00000438233 310 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC083863.1-201ENST00000438811 231 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPL26P6-201ENST00000440913 438 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL360221.1-201ENST00000445989 335 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL592447.1-201ENST00000447592 540 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 NUTF2P3-201ENST00000448540 384 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL162151.2-201ENST00000448875 158 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 RNU7-59P-201ENST00000459101 61 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPL7P15-201ENST00000461190 712 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 MTND4LP3-201ENST00000468320 276 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 RN7SL604P-201ENST00000492589 296 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPL7P47-201ENST00000497299 556 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RPS27AP13-201ENST00000498403 237 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 PAICSP4-201ENST00000517543 1253 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC022616.6-201ENST00000520479 119 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AP000857.1-201ENST00000532151 543 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC123904.2-201ENST00000548059 300 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 RN7SL600P-201ENST00000581811 299 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 BNIP3P8-201ENST00000597863 560 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 BDH2P1-201ENST00000602288 736 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC015726.1-201ENST00000602353 681 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC121334.2-201ENST00000605387 271 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC108479.2-201ENST00000617314 601 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 MIR8059-201ENST00000620427 81 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC095031.1-201ENST00000623685 672 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AL603839.4-201ENST00000624658 1005 ntBASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC38Q502W7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC38Q502W7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC38Q502W7 AL672296.1-201ENST00000427780 2158 ntBASIC4.09□□□□□ -1.76
CCDC38Q502W7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC38Q502W7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.09□□□□□ -1.76
CCDC38Q502W7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC38Q502W7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC38Q502W7 DEFB108F-201ENST00000344638 222 ntBASIC4.08□□□□□ -1.76
CCDC38Q502W7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC38Q502W7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms