Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC096577.2-201ENST00000611455 153 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC025588.4-201ENST00000615802 908 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL137003.2-201ENST00000606924 2538 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC073346.2-201ENST00000624724 2058 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 FAM133CP-201ENST00000332869 704 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 ARF4P4-201ENST00000439608 520 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC090453.1-201ENST00000495560 436 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 PRELID3BP4-201ENST00000515476 571 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 RN7SKP132-201ENST00000516001 208 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC013562.2-201ENST00000611632 603 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC025016.1-201ENST00000616746 682 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AL162373.1-201ENST00000620433 407 ntBASIC2.03□□□□□ -2.08
CCDC58Q4VC31 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC58Q4VC31 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL354685.2-201ENST00000448218 1447 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 OR5J1P-201ENST00000313544 939 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 RNU1-105P-201ENST00000363470 161 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 MIR493-201ENST00000385254 89 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 MORF4L1P4-201ENST00000450245 976 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 RNU4-18P-201ENST00000516751 149 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 GLYCAM1-201ENST00000546596 285 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AC090751.1-201ENST00000566966 267 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL355812.1-201ENST00000603215 216 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AC006023.1-201ENST00000603944 259 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 OR10AB1P-201ENST00000609613 938 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL442067.2-201ENST00000614033 363 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AL137790.1-201ENST00000634283 177 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 BX649567.1-201ENST00000642071 1134 ntBASIC2.02□□□□□ -2.09
CCDC58Q4VC31 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC58Q4VC31 SDAD1P2-201ENST00000441308 2028 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 RNU2-52P-201ENST00000410680 190 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 RNU6-233P-201ENST00000410845 141 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC006548.1-201ENST00000427470 102 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC113398.2-201ENST00000507630 558 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC083923.1-201ENST00000523708 376 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC139103.1-201ENST00000534696 1030 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC58Q4VC31 MIR3609-201ENST00000582661 80 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 AC107214.2-201ENST00000608204 634 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 CR381572.1-201ENST00000625098 102 ntBASIC2.01□□□□□ -2.09
CCDC58Q4VC31 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
CCDC58Q4VC31 CR848007.1-201ENST00000442354 1699 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC58Q4VC31 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2□□□□□ -2.09
CCDC58Q4VC31 RNU6-1249P-201ENST00000363237 111 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 RNA5SP68-201ENST00000363885 119 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 SNORA68.1-201ENST00000364537 132 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 OR5H15-201ENST00000383696 930 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 SMC4P1-201ENST00000414479 527 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2□□□□□ -2.09
CCDC58Q4VC31 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC58Q4VC31 AC000041.1-201ENST00000439655 175 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 RPL21P133-201ENST00000443666 476 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AC044797.1-201ENST00000445744 679 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 OR6K5P-201ENST00000447050 945 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AC128713.1-201ENST00000471495 306 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AC021269.2-201ENST00000532318 330 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC58Q4VC31 GTF3AP2-201ENST00000557014 266 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 ANP32BP3-201ENST00000559213 706 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AC009159.1-201ENST00000618386 642 ntBASIC2□□□□□ -2.09
CCDC58Q4VC31 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms