Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC083843.2-201ENST00000568248 6253 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNU6-1298P-201ENST00000362456 101 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 SNORA37-201ENST00000384504 129 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 MIR134-201ENST00000385258 73 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 SNORA53-201ENST00000391141 249 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AL034374.1-201ENST00000406329 351 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RPL30P2-201ENST00000414021 291 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 BX276092.3-201ENST00000424182 230 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP4-201ENST00000427757 463 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC073069.1-201ENST00000428657 441 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AL353597.2-202ENST00000434901 373 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 HMGN3P1-201ENST00000453847 193 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 HMGB1P4-201ENST00000455362 567 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNU7-27P-201ENST00000459281 62 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AP000893.1-201ENST00000474462 794 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC087385.1-201ENST00000475062 312 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNU6-919P-201ENST00000516731 104 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.713-201ENST00000517013 96 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC144568.1-201ENST00000520139 137 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC017100.2-201ENST00000584628 355 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 RNU6-84P-201ENST00000607737 102 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 MIR4679-1-201ENST00000637619 75 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC104964.3-201ENST00000606115 2860 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 MFSD8-239ENST00000641590 2479 ntBASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO4Q2I0M5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 AL109809.4-201ENST00000603520 2185 ntBASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 AC009902.3-201ENST00000606235 2172 ntBASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO4Q2I0M5 RNU6-1020P-201ENST00000363684 107 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 GNG5P2-201ENST00000372054 207 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 RNU6-47P-201ENST00000383866 107 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 Y_RNA.399-201ENST00000383955 105 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 MIR625-201ENST00000385047 85 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AL080315.1-201ENST00000406055 466 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 U3.39-201ENST00000408569 239 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 EIF4EP2-201ENST00000422816 654 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AC007161.1-204ENST00000423039 460 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 RPL36AP13-201ENST00000457490 317 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 RNU7-167P-201ENST00000459160 62 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 AC006023.2-201ENST00000609916 167 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 MIR7973-1-201ENST00000614683 76 ntBASIC5.15□□□□□ -1.59
RSPO4Q2I0M5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms