Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC008162.1-201ENST00000604718 254 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AL670379.1-201ENST00000604752 252 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AL670379.5-201ENST00000605253 252 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AL670379.12-201ENST00000605291 253 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AL670379.8-201ENST00000605353 252 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AL670379.7-201ENST00000605823 252 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 AC015967.1-201ENST00000619893 476 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CFHR3Q02985 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.67□□□□□ -1.82
CFHR3Q02985 AL359922.3-201ENST00000624779 1670 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CFHR3Q02985 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
CFHR3Q02985 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CFHR3Q02985 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CFHR3Q02985 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 TAB3P1-202ENST00000452645 1634 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AL391684.1-202ENST00000641293 1636 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 SNORD115-7-201ENST00000365306 82 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 SMIM11P1-201ENST00000369586 178 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 RNU6-398P-201ENST00000384143 109 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 UBE2V1P2-201ENST00000397758 440 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 RPS16P5-201ENST00000406501 404 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 RNU2-29P-201ENST00000410423 189 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 RN7SKP106-201ENST00000410832 272 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.66□□□□□ -1.82
CFHR3Q02985 DUTP6-201ENST00000425573 462 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 SRIP2-201ENST00000428470 166 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 RPL36AP6-201ENST00000435770 321 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC093019.1-201ENST00000443135 252 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 ELOCP23-201ENST00000452014 332 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC092001.1-201ENST00000453012 261 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC008897.1-201ENST00000494006 347 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 HMGB3P16-201ENST00000508037 287 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC108078.2-201ENST00000510750 236 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 RNU6-840P-201ENST00000517275 65 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC022882.1-201ENST00000532142 501 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.66□□□□□ -1.82
CFHR3Q02985 MIR4703-201ENST00000577728 79 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 MIR4330-201ENST00000579077 105 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 SNORD84-203ENST00000584275 78 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 MIR6820-201ENST00000611508 62 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 uc_338.18-201ENST00000615451 175 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 AL445487.1-201ENST00000415694 1580 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CFHR3Q02985 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.66□□□□□ -1.82
CFHR3Q02985 API5P2-201ENST00000397055 1498 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 AC116667.1-201ENST00000604855 2072 ntBASIC3.66□□□□□ -1.82
CFHR3Q02985 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CFHR3Q02985 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CFHR3Q02985 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CFHR3Q02985 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CFHR3Q02985 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CFHR3Q02985 AL365440.1-201ENST00000436135 2167 ntBASIC3.65□□□□□ -1.82
CFHR3Q02985 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CFHR3Q02985 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CFHR3Q02985 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CFHR3Q02985 Y_RNA.61-201ENST00000362835 102 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 SNORD113.2-201ENST00000364166 89 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNA5SP505-201ENST00000364748 108 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU4-66P-201ENST00000365199 138 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU4-20P-201ENST00000365601 151 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU6-946P-201ENST00000383878 107 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU6-1279P-201ENST00000383917 103 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 SNORA32.2-201ENST00000384049 122 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU6-76P-201ENST00000384060 104 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 Y_RNA.576-201ENST00000384781 102 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 SOD2P1-201ENST00000396543 562 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 AL359643.1-201ENST00000404109 423 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RPS4XP9-201ENST00000405151 780 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 NDUFS5P1-201ENST00000405668 289 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 AL606923.1-201ENST00000406616 190 ntBASIC3.65□□□□□ -1.83
CFHR3Q02985 RNU6-193P-201ENST00000410977 107 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms