Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 NOL8P1-201ENST00000508336 3529 ntBASIC4.14□□□□□ -1.75
NKX6-1P78426 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX6-1P78426 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX6-1P78426 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX6-1P78426 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX6-1P78426 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 RNU6-960P-201ENST00000364056 120 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 SNORD113.2-201ENST00000364166 89 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 Y_RNA.367-201ENST00000365544 101 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 RNU4-25P-201ENST00000410569 230 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 ELOCP19-201ENST00000411919 318 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 OR51A5P-201ENST00000415429 942 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 AL451139.1-201ENST00000434718 346 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 RPL36AP6-201ENST00000435770 321 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 SEPT14P3-201ENST00000439401 183 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 MTATP6P23-201ENST00000440153 476 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AL732372.2-207ENST00000445840 183 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC114755.5-201ENST00000447760 831 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX6-1P78426 FDX1P2-201ENST00000450769 375 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX6-1P78426 SEPT14P2-201ENST00000453405 183 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AL645939.1-201ENST00000453429 797 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AL356010.1-201ENST00000456364 102 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC006512.1-201ENST00000468816 291 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 AC012158.1-204ENST00000483430 465 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC116562.3-201ENST00000506136 177 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 AC004062.1-201ENST00000509926 645 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX6-1P78426 SEPT14P4-201ENST00000513445 186 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 GMPSP1-201ENST00000514075 579 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 RNU6-1092P-201ENST00000516955 87 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX6-1P78426 FO082796.1-201ENST00000523795 183 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC068587.5-201ENST00000528506 175 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX6-1P78426 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX6-1P78426 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 AC034105.3-201ENST00000565294 442 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX6-1P78426 AC130324.3-201ENST00000614165 542 ntBASIC4.13□□□□□ -1.75
NKX6-1P78426 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX6-1P78426 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX6-1P78426 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AL157700.1-201ENST00000561973 1432 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 CKAP2P1-201ENST00000555477 2049 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 AP001350.1-201ENST00000601906 1524 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 Y_RNA.22-201ENST00000362492 102 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 SNORA7.2-201ENST00000364446 145 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 RNU6-534P-201ENST00000364877 106 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 MIR454-201ENST00000390180 115 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 SNORA57.1-201ENST00000391227 145 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 SNORA48.7-201ENST00000391302 135 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC068050.1-201ENST00000394891 380 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 AL359634.1-202ENST00000404721 284 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX6-1P78426 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX6-1P78426 DUTP6-201ENST00000425573 462 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 MTATP6P4-201ENST00000427725 675 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 BTF3P10-201ENST00000433415 495 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AL138799.3-201ENST00000438968 350 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 RPS15AP9-201ENST00000439856 381 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 MTCO3P18-201ENST00000440206 761 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX6-1P78426 NDUFS5P3-201ENST00000450668 321 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX6-1P78426 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX6-1P78426 RPS24P6-201ENST00000452670 400 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 RNU6-420P-201ENST00000458780 107 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 RNU7-182P-201ENST00000459009 62 ntBASIC4.12□□□□□ -1.75
NKX6-1P78426 AC010618.1-201ENST00000469924 477 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms