Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC084757.4-201ENST00000616350 526 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO4P61968 AC015967.1-201ENST00000619893 476 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC138649.3-201ENST00000622154 254 ntBASIC3.09□□□□□ -1.91
LMO4P61968 CRYM-AS1-204ENST00000637983 556 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC099654.14-201ENST00000638599 341 ntBASIC3.09□□□□□ -1.91
LMO4P61968 AC119674.1-207ENST00000641355 633 ntBASIC3.09□□□□□ -1.91
LMO4P61968 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
LMO4P61968 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
LMO4P61968 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.09□□□□□ -1.92
LMO4P61968 LINC02471-203ENST00000641941 4752 ntBASIC3.09□□□□□ -1.92
LMO4P61968 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.09□□□□□ -1.92
LMO4P61968 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LMO4P61968 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
LMO4P61968 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 ZNF962P-201ENST00000443465 3140 ntBASIC3.08□□□□□ -1.92
LMO4P61968 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 AC130650.2-201ENST00000618736 2403 ntBASIC3.08□□□□□ -1.92
LMO4P61968 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO4P61968 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LMO4P61968 RNU6-462P-201ENST00000362659 105 ntBASIC3.08□□□□□ -1.92
LMO4P61968 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 Y_RNA.493-201ENST00000384422 102 ntBASIC3.08□□□□□ -1.92
LMO4P61968 MIR513A2-201ENST00000385249 127 ntBASIC3.08□□□□□ -1.92
LMO4P61968 RNA5SP424-201ENST00000390988 115 ntBASIC3.08□□□□□ -1.92
LMO4P61968 RNU6-837P-201ENST00000391056 108 ntBASIC3.08□□□□□ -1.92
LMO4P61968 CIR1P3-201ENST00000405137 479 ntBASIC3.08□□□□□ -1.92
LMO4P61968 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 HMGB3P23-201ENST00000414981 585 ntBASIC3.08□□□□□ -1.92
LMO4P61968 USP9YP13-201ENST00000417797 480 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC068533.1-201ENST00000418542 415 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL109913.1-201ENST00000421173 514 ntBASIC3.08□□□□□ -1.92
LMO4P61968 SDCBPP2-201ENST00000424643 885 ntBASIC3.08□□□□□ -1.92
LMO4P61968 MTND4P28-201ENST00000426217 387 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL356583.2-201ENST00000426536 280 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL035410.1-201ENST00000427409 427 ntBASIC3.08□□□□□ -1.92
LMO4P61968 ELOCP18-201ENST00000434209 337 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 HMGB1P31-201ENST00000437242 427 ntBASIC3.08□□□□□ -1.92
LMO4P61968 CYCSP43-201ENST00000438233 310 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL662791.1-201ENST00000441992 928 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 Z99127.3-201ENST00000448158 395 ntBASIC3.08□□□□□ -1.92
LMO4P61968 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO4P61968 AC006480.1-201ENST00000449887 378 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 SNORD105B-201ENST00000458770 79 ntBASIC3.08□□□□□ -1.92
LMO4P61968 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO4P61968 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 AC023141.12-201ENST00000512399 199 ntBASIC3.08□□□□□ -1.92
LMO4P61968 RNU6-583P-201ENST00000516012 92 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AC008127.2-201ENST00000549925 1075 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.08□□□□□ -1.92
LMO4P61968 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AC006960.3-201ENST00000561845 705 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO4P61968 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 AL353621.2-201ENST00000605340 133 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC091304.9-201ENST00000612091 226 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AL713922.2-201ENST00000619384 716 ntBASIC3.08□□□□□ -1.92
LMO4P61968 AC012314.7-201ENST00000619693 93 ntBASIC3.08□□□□□ -1.92
LMO4P61968 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO4P61968 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO4P61968 GDI2P1-201ENST00000429312 1336 ntBASIC3.08□□□□□ -1.92
LMO4P61968 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO4P61968 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LMO4P61968 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 RNU6-797P-201ENST00000363101 109 ntBASIC3.07□□□□□ -1.92
LMO4P61968 RNU6-339P-201ENST00000384310 107 ntBASIC3.07□□□□□ -1.92
LMO4P61968 MIR183-201ENST00000384958 110 ntBASIC3.07□□□□□ -1.92
LMO4P61968 RPS24P12-201ENST00000402084 394 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL121834.1-202ENST00000404494 277 ntBASIC3.07□□□□□ -1.92
LMO4P61968 RNU2-28P-201ENST00000410457 189 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL160275.2-201ENST00000412010 394 ntBASIC3.07□□□□□ -1.92
LMO4P61968 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO4P61968 AC245054.1-201ENST00000420944 258 ntBASIC3.07□□□□□ -1.92
LMO4P61968 ZNF863P-201ENST00000426746 417 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 SNRPEP8-201ENST00000442866 260 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms