Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.15□□□□□ -1.75
CLRN1P58418 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.15□□□□□ -1.75
CLRN1P58418 PSMA3P-201ENST00000555485 635 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 OR1F2P-201ENST00000570470 933 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 MIR4703-201ENST00000577728 79 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC024619.4-201ENST00000580924 316 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 MIR4742-201ENST00000581069 85 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.15□□□□□ -1.75
CLRN1P58418 AC012669.1-201ENST00000603209 283 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC012443.1-201ENST00000605605 231 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AL050343.2-201ENST00000607338 280 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.15□□□□□ -1.75
CLRN1P58418 U6.114-201ENST00000636407 96 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 MIR1302-1-201ENST00000637932 143 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN1P58418 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN1P58418 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.15□□□□□ -1.75
CLRN1P58418 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLRN1P58418 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN1P58418 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN1P58418 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 SNORA51.2-201ENST00000364595 132 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN1P58418 RNU4-65P-201ENST00000410473 140 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 RPL21P24-201ENST00000413752 448 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 NDUFB4P5-201ENST00000415445 361 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN1P58418 BEND7P1-201ENST00000422058 457 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN1P58418 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN1P58418 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN1P58418 Z80107.2-201ENST00000445127 392 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL118496.2-201ENST00000448300 230 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.14□□□□□ -1.75
CLRN1P58418 AL590639.1-201ENST00000456484 337 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 RPL7P19-201ENST00000469948 618 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 RPL7P23-201ENST00000493874 747 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.14□□□□□ -1.75
CLRN1P58418 RNU6-1092P-201ENST00000516955 87 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN1P58418 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.14□□□□□ -1.75
CLRN1P58418 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
CLRN1P58418 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.14□□□□□ -1.75
CLRN1P58418 AC005668.1-201ENST00000571142 476 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AL355375.2-201ENST00000574825 175 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AC007687.1-201ENST00000602704 304 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AC021646.1-201ENST00000605469 484 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 MIR6853-201ENST00000619642 74 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 AC011155.2-201ENST00000623202 216 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 FRG1KP-201ENST00000623592 341 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.14□□□□□ -1.75
CLRN1P58418 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLRN1P58418 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 AL672167.1-203ENST00000641299 2975 ntBASIC4.14□□□□□ -1.75
CLRN1P58418 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CLRN1P58418 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLRN1P58418 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLRN1P58418 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLRN1P58418 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.13□□□□□ -1.75
CLRN1P58418 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 Y_RNA.184-201ENST00000363884 108 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 UBBP2-201ENST00000376781 231 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 SNORA24.1-201ENST00000384401 135 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 MIR135A2-201ENST00000384854 100 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLRN1P58418 snosnR66.1-201ENST00000391095 99 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 CYB5AP4-201ENST00000396692 399 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 TXNP7-201ENST00000406296 293 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.13□□□□□ -1.75
CLRN1P58418 RNU4-26P-201ENST00000410270 107 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RN7SKP100-201ENST00000411258 284 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC068533.1-201ENST00000418542 415 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AC140479.3-201ENST00000418944 1126 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.13□□□□□ -1.75
CLRN1P58418 AC005154.2-201ENST00000438110 379 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RPL12P3-201ENST00000440080 396 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 RPL21P133-201ENST00000443666 476 ntBASIC4.13□□□□□ -1.75
CLRN1P58418 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms