Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 AL121576.1-201ENST00000556055 276 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 ZNF519P3-201ENST00000557158 1032 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN20P56880 UBE2L4-201ENST00000587688 464 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC012669.1-201ENST00000603209 283 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC092354.2-201ENST00000607786 514 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AP000254.1-201ENST00000609934 520 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC104073.3-201ENST00000610942 955 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN20P56880 AC008121.2-201ENST00000614647 523 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 FP236240.3-201ENST00000623061 327 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AL158801.5-201ENST00000623123 465 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC006504.1-201ENST00000562493 3666 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN20P56880 AC011460.1-201ENST00000636268 1834 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 AC009902.3-201ENST00000606235 2172 ntBASIC3.51□□□□□ -1.85
CLDN20P56880 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN20P56880 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLDN20P56880 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 Y_RNA.359-201ENST00000365498 102 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 RPL32P23-201ENST00000397237 405 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC009237.5-201ENST00000414271 501 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC099677.1-201ENST00000420575 175 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 BX890604.2-201ENST00000427883 474 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 snoU109.1-201ENST00000459339 135 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 RPL21P11-201ENST00000461458 483 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 RN7SL132P-201ENST00000478131 296 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 LARP1BP2-201ENST00000486594 519 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 Vault.1-201ENST00000516474 102 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 RNU6-528P-201ENST00000516926 100 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 CBX3P5-201ENST00000552017 521 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 AGGF1P4-201ENST00000568249 801 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 AC060771.1-201ENST00000582031 164 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC093227.2-201ENST00000589357 285 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 VN1R79P-201ENST00000593540 513 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC006254.3-201ENST00000603353 884 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 SEPT7P9-203ENST00000604116 343 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AL139286.2-201ENST00000606838 396 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 OR10AB1P-201ENST00000609613 938 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AC131902.3-201ENST00000611767 581 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AL592295.2-201ENST00000612578 206 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 RNVU1-4-201ENST00000612985 164 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 C2orf27A-204ENST00000623058 969 ntBASIC3.5□□□□□ -1.85
CLDN20P56880 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN20P56880 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN20P56880 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN20P56880 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN20P56880 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN20P56880 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLDN20P56880 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN20P56880 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CLDN20P56880 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN20P56880 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN20P56880 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.49□□□□□ -1.85
CLDN20P56880 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLDN20P56880 RNU6-335P-201ENST00000364563 113 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 RNU6-114P-201ENST00000384704 105 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 MIR134-201ENST00000385258 73 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 AL445189.1-201ENST00000405722 338 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 RNU2-16P-201ENST00000410712 136 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 MTCO3P41-201ENST00000414801 328 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 RPS7P15-201ENST00000415804 584 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 AL137014.1-201ENST00000420490 1226 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 AL159169.1-201ENST00000421119 127 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 AC092832.1-201ENST00000422934 400 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.49□□□□□ -1.85
CLDN20P56880 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.49□□□□□ -1.85
CLDN20P56880 AL353777.1-201ENST00000425552 326 ntBASIC3.49□□□□□ -1.85
CLDN20P56880 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.49□□□□□ -1.85
CLDN20P56880 USP9YP7-201ENST00000436723 430 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms