Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC090615.1-201ENST00000577519 154 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC112220.3-201ENST00000605502 502 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.61□□□□□ -1.83
LIMK1P53667 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
LIMK1P53667 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 RNU6-253P-201ENST00000384730 105 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LIMK1P53667 SAR1AP2-201ENST00000392696 594 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.6□□□□□ -1.83
LIMK1P53667 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LIMK1P53667 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMK1P53667 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.6□□□□□ -1.83
LIMK1P53667 RSL24D1P3-201ENST00000449255 495 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 PAXBP1P1-201ENST00000449315 447 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 MTCO3P20-201ENST00000454926 688 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.6□□□□□ -1.83
LIMK1P53667 S100A11P2-201ENST00000467589 312 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AC004069.2-201ENST00000505438 1114 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 MTCYBP43-201ENST00000513621 740 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMK1P53667 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMK1P53667 OR6C7P-201ENST00000547875 934 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.6□□□□□ -1.83
LIMK1P53667 COX6CP3-201ENST00000580869 223 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AL390208.1-201ENST00000605885 644 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 AL139418.1-201ENST00000613613 177 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 MIR7112-201ENST00000616126 65 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIMK1P53667 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIMK1P53667 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIMK1P53667 OR4G11P-202ENST00000642116 1414 ntBASIC3.6□□□□□ -1.83
LIMK1P53667 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMK1P53667 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIMK1P53667 AL353743.1-202ENST00000431724 1695 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIMK1P53667 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIMK1P53667 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LIMK1P53667 AL356131.1-201ENST00000405826 414 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMK1P53667 AC083875.1-201ENST00000419509 405 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 ATP5JP1-201ENST00000431631 322 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMK1P53667 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.59□□□□□ -1.83
LIMK1P53667 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.59□□□□□ -1.83
LIMK1P53667 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.59□□□□□ -1.83
LIMK1P53667 AL109741.2-201ENST00000455561 343 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMK1P53667 RPL23AP31-201ENST00000456160 467 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.59□□□□□ -1.83
LIMK1P53667 snoU13.8-201ENST00000458890 104 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AC025518.1-201ENST00000479856 347 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 MTND2P14-201ENST00000482139 351 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 KLHL2P1-201ENST00000508691 521 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.59□□□□□ -1.83
LIMK1P53667 MRPS36P3-201ENST00000519284 130 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AP001804.3-201ENST00000525146 880 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.59□□□□□ -1.83
LIMK1P53667 SNRPGP16-201ENST00000533275 226 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 CR383656.7-201ENST00000548164 174 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 ELOCP32-201ENST00000548625 324 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.59□□□□□ -1.83
LIMK1P53667 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.59□□□□□ -1.83
LIMK1P53667 BDH2P1-201ENST00000602288 736 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 DUXAP11-201ENST00000603858 526 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 RNU6-88P-201ENST00000606801 100 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMK1P53667 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIMK1P53667 ZNF542P-204ENST00000482727 1305 ntBASIC3.59□□□□□ -1.83
LIMK1P53667 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.84
LIMK1P53667 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LIMK1P53667 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LIMK1P53667 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LIMK1P53667 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 RNU6-289P-201ENST00000364093 107 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 MIR320C1-201ENST00000408566 88 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms