Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF144AP50876 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
RNF144AP50876 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RNF144AP50876 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF144AP50876 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 COX6B1P3-201ENST00000312310 260 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 SELENOWP1-201ENST00000322792 252 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 RNA5SP211-201ENST00000365516 117 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 RNU6-817P-201ENST00000391083 104 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 RNA5SP494-201ENST00000410653 129 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 RPL35AP3-201ENST00000414680 288 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC099677.3-201ENST00000427081 395 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 BX323845.3-201ENST00000428215 527 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 MTND3P9-201ENST00000429526 346 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 SETP5-201ENST00000437270 562 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC004866.2-201ENST00000438285 481 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AL390119.1-201ENST00000440329 312 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF144AP50876 AL360271.2-201ENST00000447710 161 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 ISCUP1-201ENST00000454451 448 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC090602.1-201ENST00000469695 252 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 RPS24P16-201ENST00000497294 392 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 IGKV2D-36-201ENST00000518643 226 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF144AP50876 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
RNF144AP50876 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 SYF2P1-201ENST00000550658 413 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC127381.1-201ENST00000555979 939 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF144AP50876 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF144AP50876 LRRC37A5P-203ENST00000580181 585 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF144AP50876 AC060780.2-201ENST00000589047 198 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC006115.2-201ENST00000596823 202 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AL355812.1-201ENST00000603215 216 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC015982.1-201ENST00000608113 465 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 AC243829.7-201ENST00000633081 225 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RNF144AP50876 THAP12P9-201ENST00000503971 2360 ntBASIC5.44□□□□□ -1.54
RNF144AP50876 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF144AP50876 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF144AP50876 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF144AP50876 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
RNF144AP50876 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 AC109446.4-201ENST00000623235 2755 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC090740.1-201ENST00000623193 2262 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 MTND5P9-201ENST00000503854 1755 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF144AP50876 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF144AP50876 RPL9P7-201ENST00000330965 580 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 U3.10-201ENST00000364459 214 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 Y_RNA.324-201ENST00000365165 102 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 SNORD50.2-201ENST00000365465 70 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RNU6-81P-201ENST00000365608 104 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RNU6-339P-201ENST00000384310 107 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR578-201ENST00000384828 96 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR521-1-201ENST00000384902 87 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 Y_RNA.581-201ENST00000391017 97 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RNU6-607P-201ENST00000411283 108 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF144AP50876 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF144AP50876 AC113412.1-201ENST00000425840 504 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 VTI1BP4-201ENST00000427516 527 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AL591043.1-201ENST00000432461 424 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC092573.2-201ENST00000434546 243 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AL513043.1-201ENST00000439124 535 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RNU6-1037P-201ENST00000459571 107 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC068228.1-201ENST00000461723 211 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RPL9P9-202ENST00000466501 579 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC009120.1-201ENST00000493458 473 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF144AP50876 FKBP1BP1-201ENST00000553366 325 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF144AP50876 AC002310.3-201ENST00000569728 723 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 RPL23AP87-202ENST00000573039 466 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR5696-201ENST00000578474 85 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR4271-201ENST00000582451 67 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR6809-201ENST00000612189 116 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 MIR6130-201ENST00000619419 109 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF144AP50876 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms