Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PSMA2P3-201ENST00000429685 675 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 AP000936.3-201ENST00000438127 255 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.97□□□□□ -1.29
PRIM1P49642 AC011753.3-201ENST00000443436 406 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 NDUFB1P2-201ENST00000449477 176 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 AL031274.1-201ENST00000450334 232 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 RNU6-911P-201ENST00000516523 104 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PRIM1P49642 AC008033.2-201ENST00000542626 177 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.97□□□□□ -1.29
PRIM1P49642 AC093227.2-201ENST00000589357 285 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 AL589994.2-201ENST00000621124 579 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 RNU6-156P-201ENST00000621869 107 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PRIM1P49642 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PRIM1P49642 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PRIM1P49642 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
PRIM1P49642 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
PRIM1P49642 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.96□□□□□ -1.29
PRIM1P49642 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
PRIM1P49642 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PRIM1P49642 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.96□□□□□ -1.3
PRIM1P49642 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PRIM1P49642 Y_RNA.297-201ENST00000364950 91 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 RNU6-338P-201ENST00000383888 105 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 RNU6-611P-201ENST00000384276 104 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 MIR192-201ENST00000384915 110 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 SAR1AP2-201ENST00000392696 594 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AL078599.1-201ENST00000402075 293 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 SNORA11-201ENST00000408789 128 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.96□□□□□ -1.3
PRIM1P49642 UBE2FP1-201ENST00000416536 447 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.96□□□□□ -1.3
PRIM1P49642 OR2AM1P-201ENST00000422137 422 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AC096920.1-201ENST00000423991 241 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AL606753.1-201ENST00000427435 87 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.96□□□□□ -1.3
PRIM1P49642 BX276092.6-201ENST00000430476 250 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 AL354710.1-201ENST00000453641 246 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 BX276092.8-201ENST00000455722 250 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.96□□□□□ -1.3
PRIM1P49642 RPL37P6-201ENST00000460682 294 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 HMGB1P21-201ENST00000502313 581 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.96□□□□□ -1.3
PRIM1P49642 RNU6-1212P-201ENST00000517023 104 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 RNU6-570P-201ENST00000517051 105 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 RNU6-897P-201ENST00000517135 105 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AC022868.1-201ENST00000517767 391 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.96□□□□□ -1.3
PRIM1P49642 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 AC011487.3-201ENST00000593607 453 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 AL355877.2-201ENST00000603670 358 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 IRF5P1-201ENST00000504852 2164 ntBASIC6.96□□□□□ -1.3
PRIM1P49642 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PRIM1P49642 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PRIM1P49642 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PRIM1P49642 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PRIM1P49642 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PRIM1P49642 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.95□□□□□ -1.3
PRIM1P49642 AP002512.4-202ENST00000641599 4530 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PRIM1P49642 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.95□□□□□ -1.3
PRIM1P49642 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PRIM1P49642 Y_RNA.183-201ENST00000363882 113 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 SNORD27-201ENST00000363981 72 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
PRIM1P49642 MIR600-201ENST00000385007 98 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 MIR105-1-201ENST00000385222 81 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 SNORD58.1-201ENST00000391313 66 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 RNU4-65P-201ENST00000410473 140 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 COX6B1P1-201ENST00000415962 213 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 SYF2P2-201ENST00000417620 583 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AL354766.1-201ENST00000423396 542 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 TMSB4XP3-201ENST00000445144 114 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 REG1CP-206ENST00000447469 496 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.95□□□□□ -1.3
PRIM1P49642 RPL12P39-201ENST00000455456 496 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AC092436.3-201ENST00000511788 257 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.95□□□□□ -1.3
PRIM1P49642 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.95□□□□□ -1.3
PRIM1P49642 AC068446.3-201ENST00000555285 382 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AC090517.1-201ENST00000569307 266 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 RPL23AP84-201ENST00000571193 464 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AC130289.1-201ENST00000577321 73 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.95□□□□□ -1.3
PRIM1P49642 AL591516.1-201ENST00000611326 274 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PRIM1P49642 AC127459.3-201ENST00000624328 466 ntBASIC6.95□□□□□ -1.3
PRIM1P49642 MIR7641-1-201ENST00000627518 61 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms