Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL390023.1-201ENST00000428836 262 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 RAC1P7-201ENST00000445367 377 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.78□□□□□ -1.96
RFX3P48380 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.96
RFX3P48380 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RFX3P48380 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.78□□□□□ -1.96
RFX3P48380 DEFB130C-202ENST00000530001 230 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.78□□□□□ -1.96
RFX3P48380 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX3P48380 DNAJC19P3-201ENST00000594491 331 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AC012493.2-201ENST00000595083 291 ntBASIC2.78□□□□□ -1.96
RFX3P48380 BNIP3P11-201ENST00000603878 563 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AC093673.2-201ENST00000609674 331 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AC069234.5-201ENST00000611056 416 ntBASIC2.78□□□□□ -1.96
RFX3P48380 ATP5A1P2-202ENST00000616464 443 ntBASIC2.78□□□□□ -1.96
RFX3P48380 CYCSP41-201ENST00000616920 296 ntBASIC2.78□□□□□ -1.96
RFX3P48380 MIR8057-201ENST00000620957 69 ntBASIC2.78□□□□□ -1.96
RFX3P48380 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX3P48380 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
RFX3P48380 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RFX3P48380 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 MTND5P7-201ENST00000413558 1798 ntBASIC2.77□□□□□ -1.97
RFX3P48380 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX3P48380 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 SNORA1.3-201ENST00000384676 136 ntBASIC2.77□□□□□ -1.97
RFX3P48380 MIR506-201ENST00000384998 124 ntBASIC2.77□□□□□ -1.97
RFX3P48380 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.77□□□□□ -1.97
RFX3P48380 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 MTCO1P3-201ENST00000429327 192 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX3P48380 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX3P48380 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX3P48380 USP9YP34-201ENST00000453983 808 ntBASIC2.77□□□□□ -1.97
RFX3P48380 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 AC092757.1-201ENST00000467293 467 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 OR2A20P-203ENST00000498397 1268 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC010625.1-201ENST00000511296 403 ntBASIC2.77□□□□□ -1.97
RFX3P48380 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX3P48380 RNA5SP341-201ENST00000516261 117 ntBASIC2.77□□□□□ -1.97
RFX3P48380 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX3P48380 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RFX3P48380 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 SETP7-201ENST00000552169 453 ntBASIC2.77□□□□□ -1.97
RFX3P48380 DNAJC8P1-201ENST00000554535 372 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC010653.1-201ENST00000571108 881 ntBASIC2.77□□□□□ -1.97
RFX3P48380 VN1R92P-201ENST00000598511 928 ntBASIC2.77□□□□□ -1.97
RFX3P48380 RPL23AP92-201ENST00000603609 255 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AL035411.2-201ENST00000604022 421 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC005000.2-201ENST00000605468 310 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC090617.7-201ENST00000623952 126 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AP000676.4-201ENST00000624659 623 ntBASIC2.77□□□□□ -1.97
RFX3P48380 U6.101-201ENST00000637707 76 ntBASIC2.77□□□□□ -1.97
RFX3P48380 LRRC77P-213ENST00000637727 880 ntBASIC2.77□□□□□ -1.97
RFX3P48380 AC233263.6-201ENST00000631132 1963 ntBASIC2.77□□□□□ -1.97
RFX3P48380 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFX3P48380 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
RFX3P48380 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX3P48380 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX3P48380 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
RFX3P48380 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX3P48380 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX3P48380 AC092435.3-201ENST00000565538 3654 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AC073325.2-201ENST00000339545 159 ntBASIC2.76□□□□□ -1.97
RFX3P48380 RNU6-707P-201ENST00000364647 95 ntBASIC2.76□□□□□ -1.97
RFX3P48380 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX3P48380 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 MIR135A2-201ENST00000384854 100 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AC096533.1-201ENST00000411645 353 ntBASIC2.76□□□□□ -1.97
RFX3P48380 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 PNPLA4P1-201ENST00000458328 305 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
RFX3P48380 RPL7P23-201ENST00000493874 747 ntBASIC2.76□□□□□ -1.97
RFX3P48380 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX3P48380 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX3P48380 GMPSP1-201ENST00000514075 579 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX3P48380 AP001189.2-201ENST00000527320 189 ntBASIC2.76□□□□□ -1.97
RFX3P48380 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX3P48380 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX3P48380 AC090079.2-201ENST00000575289 768 ntBASIC2.76□□□□□ -1.97
RFX3P48380 MAGOH2P-202ENST00000584384 429 ntBASIC2.76□□□□□ -1.97
RFX3P48380 GLUD1P4-201ENST00000590914 418 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms