Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN9P43378 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTPN9P43378 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTPN9P43378 DEFB108C-201ENST00000400154 252 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 RN7SKP156-201ENST00000410308 342 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 RPL36AP36-201ENST00000418616 301 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 ZNF885P-201ENST00000420174 1098 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.89□□□□□ -1.79
PTPN9P43378 AL139247.1-201ENST00000422768 325 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN9P43378 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 PDSS1P2-201ENST00000449397 678 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 NANOGP10-201ENST00000453325 895 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AL033528.1-201ENST00000453780 140 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC104308.1-201ENST00000454621 333 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 snoU109.1-201ENST00000459339 135 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN9P43378 AC007537.2-201ENST00000472093 511 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 LARP1BP2-201ENST00000486594 519 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPN9P43378 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN9P43378 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 AC109464.2-201ENST00000510242 943 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN9P43378 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.89□□□□□ -1.79
PTPN9P43378 AP003497.1-201ENST00000528472 562 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN9P43378 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPN9P43378 BNIP3P5-201ENST00000562290 498 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AGGF1P4-201ENST00000568249 801 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC087683.1-201ENST00000591187 441 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC146944.4-201ENST00000602697 718 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC103591.3-201ENST00000608684 209 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPN9P43378 AL356585.4-201ENST00000623078 1229 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 AC079597.1-201ENST00000624306 508 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 AL392088.2-201ENST00000637607 285 ntBASIC3.89□□□□□ -1.79
PTPN9P43378 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.89□□□□□ -1.79
PTPN9P43378 AC009902.3-201ENST00000606235 2172 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 RNA5SP479-201ENST00000364858 117 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN9P43378 RNU6-809P-201ENST00000384461 107 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 U3.20-201ENST00000390909 217 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 RPL32P23-201ENST00000397237 405 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 RPL7P25-201ENST00000404151 721 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AL359704.1-201ENST00000411586 781 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 RHEBP3-201ENST00000411920 351 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN9P43378 AL589823.1-201ENST00000429577 183 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 DLGAP5P1-201ENST00000430307 464 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 Z82190.1-201ENST00000454534 490 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN9P43378 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN9P43378 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN9P43378 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN9P43378 AC026402.1-201ENST00000513642 170 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.88□□□□□ -1.79
PTPN9P43378 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPN9P43378 OR4P1P-201ENST00000530808 1136 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.88□□□□□ -1.79
PTPN9P43378 BNIP3P8-201ENST00000597863 560 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AL136363.2-201ENST00000604173 851 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AL034351.1-201ENST00000605288 668 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AC011816.2-201ENST00000607089 556 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPN9P43378 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AC002550.2-201ENST00000621246 394 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 AL359740.1-201ENST00000624340 592 ntBASIC3.88□□□□□ -1.79
PTPN9P43378 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN9P43378 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTPN9P43378 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN9P43378 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN9P43378 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN9P43378 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN9P43378 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN9P43378 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN9P43378 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN9P43378 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN9P43378 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
PTPN9P43378 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN9P43378 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPN9P43378 RNU6-248P-201ENST00000410720 107 ntBASIC3.87□□□□□ -1.79
PTPN9P43378 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN9P43378 RPL7P2-201ENST00000427639 268 ntBASIC3.87□□□□□ -1.79
PTPN9P43378 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN9P43378 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN9P43378 UBE2V1P13-201ENST00000436983 439 ntBASIC3.87□□□□□ -1.79
PTPN9P43378 PGBD4P3-201ENST00000440731 581 ntBASIC3.87□□□□□ -1.79
PTPN9P43378 ATP5C1P1-201ENST00000441945 895 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms