Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC090948.1-201ENST00000607464 549 ntBASIC4.39□□□□□ -1.71
PTPN7P35236 AC007038.2-201ENST00000608095 740 ntBASIC4.39□□□□□ -1.71
PTPN7P35236 AC019193.2-201ENST00000610012 634 ntBASIC4.39□□□□□ -1.71
PTPN7P35236 FAM27D1-201ENST00000612308 341 ntBASIC4.39□□□□□ -1.71
PTPN7P35236 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN7P35236 AC131238.1-201ENST00000617135 328 ntBASIC4.39□□□□□ -1.71
PTPN7P35236 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN7P35236 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN7P35236 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN7P35236 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN7P35236 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN7P35236 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN7P35236 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN7P35236 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPN7P35236 Y_RNA.11-201ENST00000362375 109 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 Y_RNA.86-201ENST00000363020 111 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 RNU6-39P-201ENST00000384344 107 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 MT-TC-201ENST00000387405 66 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 RPS12P5-201ENST00000423449 371 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 CHIAP3-201ENST00000423668 1133 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC011998.1-201ENST00000433403 117 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 RPS20P20-201ENST00000460498 340 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 HSPD1P15-201ENST00000505573 1122 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 PCBP2P3-201ENST00000509726 843 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 RNA5SP360-201ENST00000516555 118 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPN7P35236 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN7P35236 AL355812.1-201ENST00000603215 216 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 AL158211.4-201ENST00000606988 584 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 MTND4P29-201ENST00000503122 1372 ntBASIC4.38□□□□□ -1.71
PTPN7P35236 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN7P35236 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PTPN7P35236 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN7P35236 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN7P35236 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PTPN7P35236 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PTPN7P35236 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN7P35236 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PTPN7P35236 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN7P35236 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTPN7P35236 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN7P35236 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PTPN7P35236 Y_RNA.22-201ENST00000362492 102 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 RNU1-14P-201ENST00000362759 152 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 Y_RNA.813-201ENST00000364639 102 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTPN7P35236 RPS16P5-201ENST00000406501 404 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AL354719.1-201ENST00000406535 843 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 RNA5SP56-201ENST00000410277 118 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 RNU2-62P-201ENST00000410868 191 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 RNU6-1068P-201ENST00000410958 103 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 MTCO3P12-201ENST00000416718 547 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AC005517.2-201ENST00000424673 553 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN7P35236 PSMA2P3-201ENST00000429685 675 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 LYPLA1P1-201ENST00000434514 622 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AC114755.5-201ENST00000447760 831 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 CACYBPP2-201ENST00000453625 678 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPN7P35236 AC108059.3-201ENST00000456388 214 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN7P35236 AL049714.1-201ENST00000466686 347 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 NIP7P2-201ENST00000485801 544 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN7P35236 AC111000.3-201ENST00000508057 576 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 LRRC34P2-201ENST00000514850 553 ntBASIC4.37□□□□□ -1.71
PTPN7P35236 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms