Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC024933.1-201ENST00000608472 348 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA9P31269 AC084824.4-201ENST00000620106 731 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AC010338.1-201ENST00000621823 717 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 AP000676.4-201ENST00000624659 623 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA9P31269 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HOXA9P31269 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA9P31269 SGO1P1-201ENST00000603525 1447 ntBASIC2.92□□□□□ -1.94
HOXA9P31269 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA9P31269 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA9P31269 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA9P31269 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA9P31269 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 U3.12-201ENST00000364498 214 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.91□□□□□ -1.94
HOXA9P31269 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 MIR16-1-201ENST00000385271 89 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA9P31269 RN7SKP123-201ENST00000410732 291 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AL592148.1-201ENST00000413568 445 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 MTCO3P12-201ENST00000416718 547 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC009237.2-201ENST00000421358 284 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA9P31269 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 AL035407.1-201ENST00000429211 571 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 ARL5AP4-201ENST00000430731 512 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 MTCYBP15-201ENST00000433123 1127 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA9P31269 AL513043.1-201ENST00000439124 535 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 AL592437.1-201ENST00000443781 492 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXA9P31269 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC011352.3-201ENST00000505162 593 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC105914.1-201ENST00000511798 226 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 RN7SKP43-201ENST00000516173 320 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 ERHP1-201ENST00000523006 310 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA9P31269 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC007536.1-201ENST00000533382 349 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC009097.3-201ENST00000563557 1018 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 MIR4504-201ENST00000577413 92 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 BPTFP1-201ENST00000579209 492 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AL022067.1-201ENST00000602426 454 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC144521.1-201ENST00000607148 956 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC093673.2-201ENST00000609674 331 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 RNU6-1192P-201ENST00000612197 107 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 VN1R74P-201ENST00000613259 503 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 RNU6-489P-201ENST00000618289 107 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC018755.4-201ENST00000619715 454 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA9P31269 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC092608.2-201ENST00000624427 218 ntBASIC2.91□□□□□ -1.94
HOXA9P31269 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA9P31269 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
HOXA9P31269 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA9P31269 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA9P31269 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.94
HOXA9P31269 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
HOXA9P31269 RNU6-236P-201ENST00000363886 106 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 U8.9-201ENST00000365667 134 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 MT-TC-201ENST00000387405 66 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC073264.1-201ENST00000411508 416 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 RAD23BP2-201ENST00000416003 1207 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 RPL36P19-201ENST00000430744 301 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC010881.1-201ENST00000433830 235 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 RABEPKP1-201ENST00000440529 1026 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXA9P31269 RPS3P1-201ENST00000456781 192 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 snoU13.3-201ENST00000459441 104 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC093752.1-206ENST00000511823 336 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXA9P31269 AC104417.1-201ENST00000523974 751 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
HOXA9P31269 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HOXA9P31269 HPRT1P3-201ENST00000539521 576 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXA9P31269 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXA9P31269 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC122134.1-202ENST00000569111 1201 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXA9P31269 AC090330.1-201ENST00000588646 764 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.9□□□□□ -1.95
HOXA9P31269 AC113368.1-201ENST00000603736 382 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 AC002487.1-201ENST00000604565 994 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXA9P31269 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXA9P31269 MAPK10-322ENST00000641485 4530 ntBASIC2.9□□□□□ -1.95
HOXA9P31269 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXA9P31269 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms