Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.53□□□□□ -1.68
XPAP23025 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.53□□□□□ -1.68
XPAP23025 OR51K1P-201ENST00000510214 950 ntBASIC4.53□□□□□ -1.68
XPAP23025 SEPT14P4-201ENST00000513445 186 ntBASIC4.53□□□□□ -1.68
XPAP23025 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.53□□□□□ -1.68
XPAP23025 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.53□□□□□ -1.68
XPAP23025 FO082796.1-201ENST00000523795 183 ntBASIC4.53□□□□□ -1.68
XPAP23025 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
XPAP23025 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.53□□□□□ -1.68
XPAP23025 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.53□□□□□ -1.68
XPAP23025 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.53□□□□□ -1.68
XPAP23025 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.53□□□□□ -1.68
XPAP23025 SETP7-201ENST00000552169 453 ntBASIC4.53□□□□□ -1.68
XPAP23025 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.53□□□□□ -1.68
XPAP23025 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.53□□□□□ -1.68
XPAP23025 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.53□□□□□ -1.68
XPAP23025 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
XPAP23025 COX6CP3-201ENST00000580869 223 ntBASIC4.53□□□□□ -1.68
XPAP23025 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
XPAP23025 BNIP3P10-201ENST00000605360 577 ntBASIC4.53□□□□□ -1.68
XPAP23025 AC020634.1-201ENST00000608701 549 ntBASIC4.53□□□□□ -1.68
XPAP23025 AC010338.1-201ENST00000621823 717 ntBASIC4.53□□□□□ -1.68
XPAP23025 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.53□□□□□ -1.68
XPAP23025 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XPAP23025 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
XPAP23025 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
XPAP23025 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.52□□□□□ -1.69
XPAP23025 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 Y_RNA.22-201ENST00000362492 102 ntBASIC4.52□□□□□ -1.69
XPAP23025 Y_RNA.279-201ENST00000364763 95 ntBASIC4.52□□□□□ -1.69
XPAP23025 MIR659-201ENST00000384963 97 ntBASIC4.52□□□□□ -1.69
XPAP23025 RNU6-1009P-201ENST00000390996 107 ntBASIC4.52□□□□□ -1.69
XPAP23025 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.52□□□□□ -1.69
XPAP23025 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
XPAP23025 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
XPAP23025 RPL18P10-201ENST00000425606 538 ntBASIC4.52□□□□□ -1.69
XPAP23025 C4BPAP2-201ENST00000428434 478 ntBASIC4.52□□□□□ -1.69
XPAP23025 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.52□□□□□ -1.69
XPAP23025 RPS27AP12-201ENST00000429552 465 ntBASIC4.52□□□□□ -1.69
XPAP23025 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 AC093156.1-201ENST00000440382 670 ntBASIC4.52□□□□□ -1.69
XPAP23025 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 MTND1P11-201ENST00000456661 876 ntBASIC4.52□□□□□ -1.69
XPAP23025 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.52□□□□□ -1.69
XPAP23025 RPS20P20-201ENST00000460498 340 ntBASIC4.52□□□□□ -1.69
XPAP23025 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.52□□□□□ -1.69
XPAP23025 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
XPAP23025 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.52□□□□□ -1.69
XPAP23025 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.52□□□□□ -1.69
XPAP23025 OR4R1P-201ENST00000529879 463 ntBASIC4.52□□□□□ -1.69
XPAP23025 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 HMGB1P6-201ENST00000569046 646 ntBASIC4.52□□□□□ -1.69
XPAP23025 AL356055.1-201ENST00000602528 446 ntBASIC4.52□□□□□ -1.69
XPAP23025 AL121992.2-201ENST00000606262 256 ntBASIC4.52□□□□□ -1.69
XPAP23025 AC090948.1-201ENST00000607464 549 ntBASIC4.52□□□□□ -1.69
XPAP23025 AC006504.8-201ENST00000621046 635 ntBASIC4.52□□□□□ -1.69
XPAP23025 C2orf27A-204ENST00000623058 969 ntBASIC4.52□□□□□ -1.69
XPAP23025 AL136313.1-201ENST00000624804 202 ntBASIC4.52□□□□□ -1.69
XPAP23025 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 AC139769.1-204ENST00000472297 1931 ntBASIC4.52□□□□□ -1.69
XPAP23025 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
XPAP23025 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
XPAP23025 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
XPAP23025 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
XPAP23025 CPHL1P-201ENST00000461341 3407 ntBASIC4.51□□□□□ -1.69
XPAP23025 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.51□□□□□ -1.69
XPAP23025 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
XPAP23025 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XPAP23025 XIAPP3-201ENST00000312918 795 ntBASIC4.51□□□□□ -1.69
XPAP23025 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.51□□□□□ -1.69
XPAP23025 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
XPAP23025 RNU6-223P-201ENST00000362830 107 ntBASIC4.51□□□□□ -1.69
XPAP23025 RNU11-4P-201ENST00000391149 133 ntBASIC4.51□□□□□ -1.69
XPAP23025 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
XPAP23025 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.51□□□□□ -1.69
XPAP23025 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.51□□□□□ -1.69
XPAP23025 AL732292.1-201ENST00000426692 226 ntBASIC4.51□□□□□ -1.69
XPAP23025 AC137499.1-201ENST00000427602 88 ntBASIC4.51□□□□□ -1.69
XPAP23025 AC016712.1-201ENST00000431088 378 ntBASIC4.51□□□□□ -1.69
XPAP23025 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.51□□□□□ -1.69
XPAP23025 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
XPAP23025 RPS17P13-201ENST00000448974 407 ntBASIC4.51□□□□□ -1.69
XPAP23025 AC006480.1-201ENST00000449887 378 ntBASIC4.51□□□□□ -1.69
XPAP23025 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.51□□□□□ -1.69
XPAP23025 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
XPAP23025 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms