Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL049714.1-201ENST00000466686 347 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC126389.1-201ENST00000477436 290 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.52□□□□□ -1.53
LIG1P18858 RNU6-709P-201ENST00000517257 104 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AP000676.2-201ENST00000529711 301 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 FKBP1BP1-201ENST00000553366 325 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC093249.4-201ENST00000564755 259 ntBASIC5.52□□□□□ -1.53
LIG1P18858 MIR4424-201ENST00000585257 86 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.52□□□□□ -1.53
LIG1P18858 AC087783.2-201ENST00000605070 562 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AL121992.2-201ENST00000606262 256 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC010424.2-201ENST00000607594 443 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AL359757.2-201ENST00000624309 274 ntBASIC5.52□□□□□ -1.53
LIG1P18858 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.52□□□□□ -1.53
LIG1P18858 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.52□□□□□ -1.53
LIG1P18858 INTS6P1-201ENST00000504674 2530 ntBASIC5.52□□□□□ -1.53
LIG1P18858 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LIG1P18858 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIG1P18858 AC007529.1-201ENST00000418574 2178 ntBASIC5.51□□□□□ -1.53
LIG1P18858 Y_RNA.187-201ENST00000363918 113 ntBASIC5.51□□□□□ -1.53
LIG1P18858 RNY3P13-201ENST00000365542 102 ntBASIC5.51□□□□□ -1.53
LIG1P18858 Y_RNA.414-201ENST00000384011 101 ntBASIC5.51□□□□□ -1.53
LIG1P18858 RNU6-907P-201ENST00000390924 102 ntBASIC5.51□□□□□ -1.53
LIG1P18858 MTCYBP4-201ENST00000401524 249 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AL109941.1-201ENST00000401925 229 ntBASIC5.51□□□□□ -1.53
LIG1P18858 RNU2-29P-201ENST00000410423 189 ntBASIC5.51□□□□□ -1.53
LIG1P18858 OR2AM1P-201ENST00000422137 422 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.51□□□□□ -1.53
LIG1P18858 AC005517.2-201ENST00000424673 553 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AL031736.2-201ENST00000426573 787 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LIG1P18858 AC112498.1-201ENST00000444401 332 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC104073.1-201ENST00000451988 151 ntBASIC5.51□□□□□ -1.53
LIG1P18858 RNU7-182P-201ENST00000459009 62 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC087879.1-201ENST00000474343 374 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC021382.1-201ENST00000483523 359 ntBASIC5.51□□□□□ -1.53
LIG1P18858 MRPS33P2-201ENST00000507850 322 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC104057.1-201ENST00000515547 497 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC022634.1-201ENST00000520765 532 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AP001922.4-201ENST00000526967 290 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC011979.2-201ENST00000527568 352 ntBASIC5.51□□□□□ -1.53
LIG1P18858 SNRPGP18-201ENST00000553000 214 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 AL049839.1-201ENST00000556151 657 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 MIR3934-201ENST00000579806 107 ntBASIC5.51□□□□□ -1.53
LIG1P18858 MIR4775-201ENST00000581168 75 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC100830.2-201ENST00000581636 240 ntBASIC5.51□□□□□ -1.53
LIG1P18858 MIR3668-201ENST00000582138 75 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.51□□□□□ -1.53
LIG1P18858 AC019206.1-201ENST00000621938 425 ntBASIC5.51□□□□□ -1.53
LIG1P18858 AC005086.4-201ENST00000623065 213 ntBASIC5.51□□□□□ -1.53
LIG1P18858 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
LIG1P18858 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LIG1P18858 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIG1P18858 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LIG1P18858 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 AC108751.5-201ENST00000492880 1336 ntBASIC5.5□□□□□ -1.53
LIG1P18858 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIG1P18858 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIG1P18858 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIG1P18858 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIG1P18858 RNU6-552P-201ENST00000362869 119 ntBASIC5.5□□□□□ -1.53
LIG1P18858 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.5□□□□□ -1.53
LIG1P18858 PMCHL1-202ENST00000423102 261 ntBASIC5.5□□□□□ -1.53
LIG1P18858 MED13P1-201ENST00000428342 171 ntBASIC5.5□□□□□ -1.53
LIG1P18858 MTATP6P16-201ENST00000434543 526 ntBASIC5.5□□□□□ -1.53
LIG1P18858 RPS26P2-201ENST00000440331 348 ntBASIC5.5□□□□□ -1.53
LIG1P18858 MRPL48P1-201ENST00000445390 636 ntBASIC5.5□□□□□ -1.53
LIG1P18858 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.5□□□□□ -1.53
LIG1P18858 RPL7P52-201ENST00000449200 742 ntBASIC5.5□□□□□ -1.53
LIG1P18858 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.5□□□□□ -1.53
LIG1P18858 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 RNU7-66P-201ENST00000459469 62 ntBASIC5.5□□□□□ -1.53
LIG1P18858 S100A11P1-201ENST00000477525 312 ntBASIC5.5□□□□□ -1.53
LIG1P18858 RN7SL558P-201ENST00000497468 299 ntBASIC5.5□□□□□ -1.53
LIG1P18858 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.5□□□□□ -1.53
LIG1P18858 FTH1P21-201ENST00000512179 511 ntBASIC5.5□□□□□ -1.53
LIG1P18858 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.5□□□□□ -1.53
LIG1P18858 AC093853.1-201ENST00000515689 483 ntBASIC5.5□□□□□ -1.53
LIG1P18858 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.5□□□□□ -1.53
LIG1P18858 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.5□□□□□ -1.53
LIG1P18858 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.5□□□□□ -1.53
LIG1P18858 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms