Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.66□□□□□ -1.66
ATF4P18848 MRPS21P8-201ENST00000569196 235 ntBASIC4.66□□□□□ -1.66
ATF4P18848 RNU4ATAC-201ENST00000580972 127 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.66□□□□□ -1.66
ATF4P18848 POLR3GP2-201ENST00000588366 668 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC093227.2-201ENST00000589357 285 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 APOOP1-201ENST00000604695 592 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC016727.1-205ENST00000605437 569 ntBASIC4.66□□□□□ -1.66
ATF4P18848 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 AC141002.1-201ENST00000607025 279 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR1302-2-201ENST00000607096 138 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 RN7SL261P-201ENST00000613441 282 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR6721-201ENST00000617181 87 ntBASIC4.66□□□□□ -1.66
ATF4P18848 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 AC126177.8-201ENST00000618339 1015 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR6861-201ENST00000618657 64 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AL512652.1-201ENST00000619006 500 ntBASIC4.66□□□□□ -1.66
ATF4P18848 SNORD39.4-201ENST00000620099 78 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC008013.2-202ENST00000637965 364 ntBASIC4.66□□□□□ -1.66
ATF4P18848 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 THAP12P9-201ENST00000503971 2360 ntBASIC4.65□□□□□ -1.66
ATF4P18848 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
ATF4P18848 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATF4P18848 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATF4P18848 AC092681.1-201ENST00000297369 291 ntBASIC4.65□□□□□ -1.67
ATF4P18848 Y_RNA.315-201ENST00000365117 102 ntBASIC4.65□□□□□ -1.67
ATF4P18848 Y_RNA.339-201ENST00000365325 102 ntBASIC4.65□□□□□ -1.67
ATF4P18848 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATF4P18848 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.65□□□□□ -1.67
ATF4P18848 RNU6-214P-201ENST00000384130 107 ntBASIC4.65□□□□□ -1.67
ATF4P18848 RNA5SP241-201ENST00000391326 114 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.65□□□□□ -1.67
ATF4P18848 AL158156.1-201ENST00000422509 473 ntBASIC4.65□□□□□ -1.67
ATF4P18848 CRIP1P1-201ENST00000427567 185 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.65□□□□□ -1.67
ATF4P18848 AC018644.1-201ENST00000429934 551 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL445928.1-201ENST00000435545 222 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.65□□□□□ -1.67
ATF4P18848 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.65□□□□□ -1.67
ATF4P18848 AL360271.2-201ENST00000447710 161 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AC009120.1-201ENST00000493458 473 ntBASIC4.65□□□□□ -1.67
ATF4P18848 RPS27P27-201ENST00000498779 255 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATF4P18848 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.65□□□□□ -1.67
ATF4P18848 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.65□□□□□ -1.67
ATF4P18848 AC134698.5-201ENST00000519444 336 ntBASIC4.65□□□□□ -1.67
ATF4P18848 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.65□□□□□ -1.67
ATF4P18848 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.65□□□□□ -1.67
ATF4P18848 COPS8P3-201ENST00000526024 482 ntBASIC4.65□□□□□ -1.67
ATF4P18848 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.65□□□□□ -1.67
ATF4P18848 TRAV28-201ENST00000557548 323 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AC073539.2-201ENST00000597113 165 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.65□□□□□ -1.67
ATF4P18848 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL138726.1-201ENST00000614873 333 ntBASIC4.65□□□□□ -1.67
ATF4P18848 AL031601.2-202ENST00000622650 282 ntBASIC4.65□□□□□ -1.67
ATF4P18848 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.65□□□□□ -1.67
ATF4P18848 AC099654.10-201ENST00000640395 161 ntBASIC4.65□□□□□ -1.67
ATF4P18848 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.65□□□□□ -1.67
ATF4P18848 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATF4P18848 AC007785.2-201ENST00000598627 1916 ntBASIC4.65□□□□□ -1.67
ATF4P18848 OR14L1P-202ENST00000641545 3009 ntBASIC4.65□□□□□ -1.67
ATF4P18848 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ATF4P18848 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATF4P18848 AL133243.3-201ENST00000617415 3004 ntBASIC4.64□□□□□ -1.67
ATF4P18848 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.64□□□□□ -1.67
ATF4P18848 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.64□□□□□ -1.67
ATF4P18848 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ATF4P18848 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATF4P18848 OR10R3P-201ENST00000361688 942 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RNU6-562P-201ENST00000362731 107 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RNA5SP77-201ENST00000365394 120 ntBASIC4.64□□□□□ -1.67
ATF4P18848 DEFB109C-201ENST00000382575 264 ntBASIC4.64□□□□□ -1.67
ATF4P18848 DEFB109B-201ENST00000382656 264 ntBASIC4.64□□□□□ -1.67
ATF4P18848 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ATF4P18848 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ATF4P18848 AL360182.1-201ENST00000397433 468 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RN7SKP158-201ENST00000410453 326 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RN7SKP100-201ENST00000411258 284 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RPL36AP10-201ENST00000421785 322 ntBASIC4.64□□□□□ -1.67
ATF4P18848 RPS3AP52-201ENST00000435639 297 ntBASIC4.64□□□□□ -1.67
ATF4P18848 AC007677.1-201ENST00000445757 515 ntBASIC4.64□□□□□ -1.67
ATF4P18848 FABP5P15-201ENST00000453566 214 ntBASIC4.64□□□□□ -1.67
ATF4P18848 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.64□□□□□ -1.67
ATF4P18848 SNRPGP5-201ENST00000456003 220 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 652.9 ms