Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.3□□□□□ -2.04
ATF1P18846 MIR3944-201ENST00000581277 108 ntBASIC2.3□□□□□ -2.04
ATF1P18846 MIR3609-201ENST00000582661 80 ntBASIC2.3□□□□□ -2.04
ATF1P18846 TPMTP1-201ENST00000592307 737 ntBASIC2.3□□□□□ -2.04
ATF1P18846 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.3□□□□□ -2.04
ATF1P18846 SNHG22-203ENST00000617833 660 ntBASIC2.3□□□□□ -2.04
ATF1P18846 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATF1P18846 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.3□□□□□ -2.04
ATF1P18846 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
ATF1P18846 AC138915.1-201ENST00000565427 1685 ntBASIC2.29□□□□□ -2.04
ATF1P18846 MTCO1P23-201ENST00000415223 1526 ntBASIC2.29□□□□□ -2.04
ATF1P18846 MTND4P21-201ENST00000453886 1357 ntBASIC2.29□□□□□ -2.04
ATF1P18846 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ATF1P18846 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ATF1P18846 AL672167.1-206ENST00000356293 943 ntBASIC2.29□□□□□ -2.04
ATF1P18846 RNA5SP139-201ENST00000364340 117 ntBASIC2.29□□□□□ -2.04
ATF1P18846 RNU6-1180P-201ENST00000364935 107 ntBASIC2.29□□□□□ -2.04
ATF1P18846 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
ATF1P18846 ARF4P3-201ENST00000397387 509 ntBASIC2.29□□□□□ -2.04
ATF1P18846 RNU2-15P-201ENST00000410692 191 ntBASIC2.29□□□□□ -2.04
ATF1P18846 RNA5SP21-201ENST00000410917 96 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.29□□□□□ -2.04
ATF1P18846 AL357078.2-201ENST00000416486 427 ntBASIC2.29□□□□□ -2.04
ATF1P18846 KRR1P1-201ENST00000419430 803 ntBASIC2.29□□□□□ -2.04
ATF1P18846 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.29□□□□□ -2.04
ATF1P18846 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.29□□□□□ -2.04
ATF1P18846 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.29□□□□□ -2.04
ATF1P18846 AC087499.2-201ENST00000432861 149 ntBASIC2.29□□□□□ -2.04
ATF1P18846 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.29□□□□□ -2.04
ATF1P18846 AC002542.1-201ENST00000440683 193 ntBASIC2.29□□□□□ -2.04
ATF1P18846 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.29□□□□□ -2.04
ATF1P18846 PNPLA4P1-201ENST00000458328 305 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AC126182.1-201ENST00000478134 357 ntBASIC2.29□□□□□ -2.04
ATF1P18846 HIGD1AP13-201ENST00000509878 289 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AC108043.1-201ENST00000512696 574 ntBASIC2.29□□□□□ -2.04
ATF1P18846 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ATF1P18846 AC128657.1-201ENST00000549459 145 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.29□□□□□ -2.04
ATF1P18846 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATF1P18846 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.29□□□□□ -2.04
ATF1P18846 LARP7P2-201ENST00000575306 125 ntBASIC2.29□□□□□ -2.04
ATF1P18846 MIR4325-201ENST00000583049 90 ntBASIC2.29□□□□□ -2.04
ATF1P18846 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AC024220.1-201ENST00000603675 484 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AC019159.1-201ENST00000605094 187 ntBASIC2.29□□□□□ -2.04
ATF1P18846 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.29□□□□□ -2.04
ATF1P18846 AP000254.1-201ENST00000609934 520 ntBASIC2.29□□□□□ -2.04
ATF1P18846 MIR6798-201ENST00000612887 67 ntBASIC2.29□□□□□ -2.04
ATF1P18846 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.29□□□□□ -2.04
ATF1P18846 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ATF1P18846 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.04
ATF1P18846 TAB3P1-202ENST00000452645 1634 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AP000526.1-201ENST00000603308 1388 ntBASIC2.28□□□□□ -2.04
ATF1P18846 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 GDI2P1-201ENST00000429312 1336 ntBASIC2.28□□□□□ -2.04
ATF1P18846 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 RNU6-353P-201ENST00000364266 108 ntBASIC2.28□□□□□ -2.04
ATF1P18846 RNU1-112P-201ENST00000364401 164 ntBASIC2.28□□□□□ -2.04
ATF1P18846 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
ATF1P18846 RNU6-657P-201ENST00000383904 107 ntBASIC2.28□□□□□ -2.04
ATF1P18846 MIR23B-201ENST00000384832 97 ntBASIC2.28□□□□□ -2.04
ATF1P18846 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ATF1P18846 RNU2-47P-201ENST00000410649 186 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AL592148.1-201ENST00000413568 445 ntBASIC2.28□□□□□ -2.04
ATF1P18846 BX682237.1-201ENST00000415016 335 ntBASIC2.28□□□□□ -2.04
ATF1P18846 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 RSL24D1P8-201ENST00000434442 492 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.28□□□□□ -2.04
ATF1P18846 GXYLT1P1-201ENST00000446657 490 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.28□□□□□ -2.04
ATF1P18846 RSL24D1P3-201ENST00000449255 495 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.28□□□□□ -2.04
ATF1P18846 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.28□□□□□ -2.04
ATF1P18846 RNA5SP135-201ENST00000517019 125 ntBASIC2.28□□□□□ -2.04
ATF1P18846 MTCO1P47-201ENST00000523889 1271 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 AC011611.5-201ENST00000552477 578 ntBASIC2.28□□□□□ -2.04
ATF1P18846 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.28□□□□□ -2.04
ATF1P18846 CYCSP39-201ENST00000565821 309 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC011260.1-201ENST00000578420 472 ntBASIC2.28□□□□□ -2.04
ATF1P18846 MIR5195-201ENST00000583555 115 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.28□□□□□ -2.04
ATF1P18846 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.28□□□□□ -2.04
ATF1P18846 AC007179.3-201ENST00000604976 235 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AL137843.1-201ENST00000605078 385 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AL161734.1-201ENST00000609720 557 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
ATF1P18846 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ATF1P18846 AL356585.4-201ENST00000623078 1229 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC004777.1-201ENST00000624317 287 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC099654.7-201ENST00000635788 2127 ntBASIC2.28□□□□□ -2.04
ATF1P18846 AC009812.4-201ENST00000569134 1805 ntBASIC2.28□□□□□ -2.04
ATF1P18846 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.28□□□□□ -2.04
ATF1P18846 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms