Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.26□□□□□ -2.05
COL11A1P12107 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 AC006483.1-201ENST00000487308 313 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 MTCO1P30-201ENST00000515244 580 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 BX322635.1-201ENST00000605804 496 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AC013562.2-201ENST00000611632 603 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AC005156.1-201ENST00000613371 573 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.26□□□□□ -2.05
COL11A1P12107 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
COL11A1P12107 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL11A1P12107 AL353746.1-201ENST00000566293 6881 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
COL11A1P12107 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL11A1P12107 HMGB1P13-201ENST00000406019 642 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 MTCO3P30-201ENST00000426425 670 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AL591719.1-201ENST00000444669 744 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 FABP5P13-201ENST00000452144 328 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 GZMAP1-201ENST00000503054 631 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 RNU6-491P-201ENST00000516099 110 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.26□□□□□ -2.05
COL11A1P12107 AL157700.1-201ENST00000561973 1432 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 ZNF192P1-203ENST00000565888 810 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 RPL23AP78-201ENST00000599928 470 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 AC022079.2-201ENST00000619739 566 ntBASIC2.26□□□□□ -2.05
COL11A1P12107 RNU2-37P-201ENST00000410695 177 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 HMGN2P35-201ENST00000412164 270 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.25□□□□□ -2.05
COL11A1P12107 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.25□□□□□ -2.05
COL11A1P12107 AC009414.1-201ENST00000427200 443 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.25□□□□□ -2.05
COL11A1P12107 RPS7P5-201ENST00000441482 581 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.25□□□□□ -2.05
COL11A1P12107 RPL37P6-202ENST00000464216 403 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 AC007182.2-201ENST00000489251 402 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 RNU6-760P-201ENST00000516078 97 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.25□□□□□ -2.05
COL11A1P12107 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
COL11A1P12107 AL731537.2-201ENST00000561565 951 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
COL11A1P12107 AC108479.2-201ENST00000617314 601 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 uc_338.9-201ENST00000617424 182 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 MIR4496-201ENST00000635896 61 ntBASIC2.25□□□□□ -2.05
COL11A1P12107 RNA5SP295-201ENST00000362655 121 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 Y_RNA.508-201ENST00000384502 114 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 MIR583-201ENST00000384846 75 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 HNRNPDP2-201ENST00000406475 478 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC005517.2-201ENST00000424673 553 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC108667.1-201ENST00000428618 249 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL11A1P12107 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC090695.1-201ENST00000561269 1222 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 DUXAP3-201ENST00000603616 594 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC069304.3-201ENST00000603938 1084 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC022387.2-201ENST00000604050 448 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AP004372.1-201ENST00000604842 844 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
COL11A1P12107 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL11A1P12107 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.24□□□□□ -2.05
COL11A1P12107 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
COL11A1P12107 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL11A1P12107 RNU6-14P-201ENST00000384630 106 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 MTND4P13-201ENST00000402078 1023 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 RPL26P37-201ENST00000411983 438 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AF274854.1-201ENST00000413236 615 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 RPL23AP7-203ENST00000449021 469 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC089999.1-201ENST00000460336 374 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC078918.1-201ENST00000498515 228 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 PCNAP1-201ENST00000505363 709 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC117525.1-201ENST00000515228 503 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC087241.2-201ENST00000535801 324 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.24□□□□□ -2.05
COL11A1P12107 AL021368.1-201ENST00000607490 540 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 AL118556.2-201ENST00000614375 824 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
COL11A1P12107 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL11A1P12107 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL11A1P12107 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL11A1P12107 AC007256.1-201ENST00000392253 2765 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL11A1P12107 RNU6-386P-201ENST00000362650 107 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 AL138799.3-201ENST00000438968 350 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 TPRKBP1-201ENST00000456243 481 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 RPL30P11-201ENST00000495304 339 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms