Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 NTAN1P1-201ENST00000603150 646 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC009220.3-201ENST00000604318 586 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 RPL23AP88-201ENST00000605759 454 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AL390240.1-201ENST00000612950 384 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC007256.1-201ENST00000392253 2765 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 RNU6-799P-201ENST00000363567 107 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AL513331.1-201ENST00000411908 397 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 USP9YP27-201ENST00000418455 438 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 YWHAZP8-201ENST00000436935 731 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 RPS29P12-201ENST00000460178 152 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC090515.1-201ENST00000465295 476 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC010285.1-201ENST00000470580 392 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC072039.1-201ENST00000477611 581 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC107398.1-201ENST00000486904 505 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 MTND4P2-201ENST00000507767 1203 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 AC133963.2-201ENST00000513686 578 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.9□□□□□ -2.1
FREM3P0C091 AC090695.1-201ENST00000561269 1222 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.9□□□□□ -2.1
FREM3P0C091 AC073387.2-201ENST00000604797 784 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 HSPE1P14-201ENST00000605812 302 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC131902.3-201ENST00000611767 581 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 AC020923.1-201ENST00000624021 917 ntBASIC1.9□□□□□ -2.1
FREM3P0C091 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.9□□□□□ -2.1
FREM3P0C091 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
FREM3P0C091 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
FREM3P0C091 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
FREM3P0C091 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 RNA5SP88-201ENST00000365560 109 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AF274854.1-201ENST00000413236 615 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.9□□□□□ -2.11
FREM3P0C091 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.9□□□□□ -2.11
FREM3P0C091 RPL30P9-201ENST00000465586 330 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.9□□□□□ -2.11
FREM3P0C091 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.9□□□□□ -2.11
FREM3P0C091 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.9□□□□□ -2.11
FREM3P0C091 SNORD59.2-201ENST00000516873 68 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.9□□□□□ -2.11
FREM3P0C091 AC026464.5-201ENST00000562497 722 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AC103810.1-201ENST00000579873 453 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AL109653.1-201ENST00000603091 248 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AC073111.2-201ENST00000605657 1075 ntBASIC1.9□□□□□ -2.11
FREM3P0C091 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.9□□□□□ -2.11
FREM3P0C091 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
FREM3P0C091 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FREM3P0C091 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.89□□□□□ -2.11
FREM3P0C091 MTATP6P4-201ENST00000427725 675 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 CBWD4P-201ENST00000445695 655 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 RPL7P12-201ENST00000446719 750 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 MTCO3P11-201ENST00000455103 774 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.89□□□□□ -2.11
FREM3P0C091 RPS4XP6-201ENST00000477670 797 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 AC116337.1-201ENST00000509680 687 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.89□□□□□ -2.11
FREM3P0C091 RNU6-56P-201ENST00000516986 93 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.89□□□□□ -2.11
FREM3P0C091 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.89□□□□□ -2.11
FREM3P0C091 AP004247.3-201ENST00000608682 624 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 NF1P10-201ENST00000613227 742 ntBASIC1.89□□□□□ -2.11
FREM3P0C091 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
FREM3P0C091 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
FREM3P0C091 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FREM3P0C091 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 DEFB109C-201ENST00000382575 264 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 DEFB109B-201ENST00000382656 264 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 MIR764-201ENST00000390811 85 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.88□□□□□ -2.11
FREM3P0C091 TOMM22P1-201ENST00000418578 312 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 PTP4A1P7-201ENST00000423476 514 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 DPPA2P1-201ENST00000428060 556 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 AL591806.2-201ENST00000433122 173 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 AC010881.1-201ENST00000433830 235 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.88□□□□□ -2.11
FREM3P0C091 HMGB3P12-201ENST00000438745 556 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 SSXP4-201ENST00000451349 245 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.88□□□□□ -2.11
FREM3P0C091 AC109486.1-201ENST00000486833 374 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 SNORA31.11-201ENST00000516528 139 ntBASIC1.88□□□□□ -2.11
FREM3P0C091 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.88□□□□□ -2.11
FREM3P0C091 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.88□□□□□ -2.11
FREM3P0C091 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.88□□□□□ -2.11
FREM3P0C091 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.88□□□□□ -2.11
FREM3P0C091 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms