Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.67□□□□□ -2.14
ABCA1O95477 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.67□□□□□ -2.14
ABCA1O95477 AC020895.1-201ENST00000595362 272 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 DUXAP3-201ENST00000603616 594 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 AC120053.1-201ENST00000607706 736 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
ABCA1O95477 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.67□□□□□ -2.14
ABCA1O95477 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA1O95477 Y_RNA.540-201ENST00000384638 111 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 RNU2-17P-201ENST00000410290 190 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA1O95477 RPL7P46-201ENST00000425129 740 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 HMGB1P45-201ENST00000435986 653 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 NDUFA5P4-201ENST00000436704 385 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 HMGN2P21-201ENST00000447764 270 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 ARPC3P2-201ENST00000457786 533 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 RPL21P103-201ENST00000479921 488 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC007182.2-201ENST00000489251 402 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC111000.5-201ENST00000506559 1178 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.66□□□□□ -2.14
ABCA1O95477 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA1O95477 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA1O95477 AC138649.5-201ENST00000637456 137 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC073055.1-201ENST00000456901 1621 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA1O95477 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA1O95477 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
ABCA1O95477 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
ABCA1O95477 RNU6-50P-201ENST00000362356 103 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA1O95477 EI24P1-201ENST00000416584 867 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA1O95477 SETP8-201ENST00000435341 628 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA1O95477 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.66□□□□□ -2.14
ABCA1O95477 AC108120.2-201ENST00000512973 294 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 RN7SKP234-201ENST00000517173 224 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA1O95477 AC012182.1-201ENST00000570133 895 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AL356280.1-201ENST00000603614 379 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC092650.2-201ENST00000619984 902 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC002064.3-201ENST00000623448 346 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 AC027514.1-201ENST00000588561 1603 ntBASIC1.66□□□□□ -2.14
ABCA1O95477 RNU6-1251P-201ENST00000364502 107 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 SNORA51.2-201ENST00000364595 132 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 RNU6-707P-201ENST00000364647 95 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.65□□□□□ -2.14
ABCA1O95477 HSPE1P28-201ENST00000443139 211 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 ARL5AP2-201ENST00000444698 533 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC027673.1-201ENST00000456245 405 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 RPL5P13-201ENST00000462840 709 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC011352.3-201ENST00000505162 593 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.65□□□□□ -2.14
ABCA1O95477 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.65□□□□□ -2.14
ABCA1O95477 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA1O95477 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.65□□□□□ -2.14
ABCA1O95477 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.65□□□□□ -2.14
ABCA1O95477 MIR4474-201ENST00000579189 78 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.65□□□□□ -2.14
ABCA1O95477 AP003117.1-201ENST00000602771 554 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.6-201ENST00000603753 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.11-201ENST00000604059 253 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.10-201ENST00000604330 253 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC008162.1-201ENST00000604718 254 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.1-201ENST00000604752 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AP004372.1-201ENST00000604842 844 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.2-201ENST00000604983 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.5-201ENST00000605253 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.4-201ENST00000605279 254 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.12-201ENST00000605291 253 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.8-201ENST00000605353 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.9-201ENST00000605428 253 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AL670379.7-201ENST00000605823 252 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 AC090425.2-201ENST00000608818 501 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 MIR6132-201ENST00000622083 109 ntBASIC1.65□□□□□ -2.14
ABCA1O95477 CKAP2P1-201ENST00000555477 2049 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ABCA1O95477 AC019129.1-201ENST00000403786 261 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA1O95477 RNU6-233P-201ENST00000410845 141 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 AC241520.1-201ENST00000422654 1099 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA1O95477 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA1O95477 AC109486.1-201ENST00000486833 374 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA1O95477 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA1O95477 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA1O95477 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA1O95477 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA1O95477 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA1O95477 AC245128.3-201ENST00000594721 748 ntBASIC1.65□□□□□ -2.15
ABCA1O95477 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ABCA1O95477 MAPK10-266ENST00000641066 6555 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 ZNF271P-202ENST00000465539 1970 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA1O95477 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms