Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNU6-232P-201ENST00000517144 64 ntBASIC3.91□□□□□ -1.78
RTN3O95197 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN3O95197 HIGD1AP10-201ENST00000527837 282 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC013828.2-201ENST00000532487 235 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AL121766.1-201ENST00000547436 487 ntBASIC3.91□□□□□ -1.78
RTN3O95197 MRPS36P5-201ENST00000551909 298 ntBASIC3.91□□□□□ -1.78
RTN3O95197 SETP2-201ENST00000553886 926 ntBASIC3.91□□□□□ -1.78
RTN3O95197 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN3O95197 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN3O95197 MIR4444-1-201ENST00000581696 74 ntBASIC3.91□□□□□ -1.78
RTN3O95197 MIR4444-2-201ENST00000584390 74 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN3O95197 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN3O95197 AP001429.1-201ENST00000602568 530 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC008739.3-201ENST00000603262 127 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC112187.2-201ENST00000604345 283 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC103710.4-201ENST00000609301 899 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC106028.5-201ENST00000610332 395 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC079597.1-201ENST00000624306 508 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AL034408.1-202ENST00000636088 415 ntBASIC3.91□□□□□ -1.78
RTN3O95197 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN3O95197 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN3O95197 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RTN3O95197 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN3O95197 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.9□□□□□ -1.78
RTN3O95197 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.78
RTN3O95197 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN3O95197 SNORA73.2-201ENST00000364946 201 ntBASIC3.9□□□□□ -1.79
RTN3O95197 U3.20-201ENST00000390909 217 ntBASIC3.9□□□□□ -1.79
RTN3O95197 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
RTN3O95197 RPS3AP24-201ENST00000407896 734 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN3O95197 AL365203.2-201ENST00000423444 196 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC002075.2-201ENST00000425207 252 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AL358232.1-201ENST00000448030 501 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN3O95197 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN3O95197 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN3O95197 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.9□□□□□ -1.79
RTN3O95197 BZW1P2-201ENST00000473537 826 ntBASIC3.9□□□□□ -1.79
RTN3O95197 RPL30P6-201ENST00000475925 342 ntBASIC3.9□□□□□ -1.79
RTN3O95197 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN3O95197 VN1R104P-201ENST00000505115 1009 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC010486.2-201ENST00000505572 483 ntBASIC3.9□□□□□ -1.79
RTN3O95197 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN3O95197 AC026801.2-201ENST00000515352 425 ntBASIC3.9□□□□□ -1.79
RTN3O95197 SYF2P1-201ENST00000550658 413 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.9□□□□□ -1.79
RTN3O95197 MED28P6-201ENST00000558776 231 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.9□□□□□ -1.79
RTN3O95197 AC024220.1-201ENST00000603675 484 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC107214.2-201ENST00000608204 634 ntBASIC3.9□□□□□ -1.79
RTN3O95197 MIR8058-201ENST00000615737 89 ntBASIC3.9□□□□□ -1.79
RTN3O95197 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN3O95197 AL603755.1-201ENST00000619504 163 ntBASIC3.9□□□□□ -1.79
RTN3O95197 MIR6075-201ENST00000620782 95 ntBASIC3.9□□□□□ -1.79
RTN3O95197 AC019226.2-201ENST00000625973 424 ntBASIC3.9□□□□□ -1.79
RTN3O95197 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN3O95197 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RTN3O95197 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN3O95197 AC092326.2-201ENST00000624772 1561 ntBASIC3.89□□□□□ -1.79
RTN3O95197 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTN3O95197 AC009812.4-201ENST00000569134 1805 ntBASIC3.89□□□□□ -1.79
RTN3O95197 RNA5SP387-201ENST00000364226 106 ntBASIC3.89□□□□□ -1.79
RTN3O95197 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTN3O95197 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
RTN3O95197 SOD2P1-201ENST00000396543 562 ntBASIC3.89□□□□□ -1.79
RTN3O95197 ATP5A1P2-201ENST00000412323 255 ntBASIC3.89□□□□□ -1.79
RTN3O95197 RPL31P12-201ENST00000422587 358 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AC024082.2-201ENST00000434771 238 ntBASIC3.89□□□□□ -1.79
RTN3O95197 THAP5P1-201ENST00000439089 262 ntBASIC3.89□□□□□ -1.79
RTN3O95197 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.89□□□□□ -1.79
RTN3O95197 AC007967.1-201ENST00000455422 1159 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.89□□□□□ -1.79
RTN3O95197 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AP000563.1-201ENST00000490865 758 ntBASIC3.89□□□□□ -1.79
RTN3O95197 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTN3O95197 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN3O95197 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.89□□□□□ -1.79
RTN3O95197 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN3O95197 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
RTN3O95197 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN3O95197 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN3O95197 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
RTN3O95197 AL391156.1-201ENST00000554965 554 ntBASIC3.89□□□□□ -1.79
RTN3O95197 BDH2P1-201ENST00000602288 736 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AP000676.3-201ENST00000623299 569 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
RTN3O95197 OR6C71P-202ENST00000641886 1107 ntBASIC3.89□□□□□ -1.79
RTN3O95197 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTN3O95197 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTN3O95197 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RTN3O95197 AC006378.2-201ENST00000623178 2476 ntBASIC3.88□□□□□ -1.79
RTN3O95197 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RTN3O95197 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN3O95197 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN3O95197 MIR208A-201ENST00000362287 71 ntBASIC3.88□□□□□ -1.79
RTN3O95197 Y_RNA.169-201ENST00000363745 96 ntBASIC3.88□□□□□ -1.79
RTN3O95197 RNA5SP51-201ENST00000364750 119 ntBASIC3.88□□□□□ -1.79
RTN3O95197 RNU6-114P-201ENST00000384704 105 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms