Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC010460.1-201ENST00000507087 466 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC022447.1-201ENST00000515358 464 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 SNORA31.8-201ENST00000516327 108 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 RNA5SP164-201ENST00000516533 110 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 SNORA31.22-201ENST00000517204 135 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 SUMO2P20-201ENST00000520803 283 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 IGKV2D-19-201ENST00000523346 262 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AP003122.4-201ENST00000530980 758 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AP000857.1-201ENST00000532151 543 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC135279.1-201ENST00000543493 504 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 RPL21P5-201ENST00000554662 472 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AL133153.1-201ENST00000557756 303 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC009977.1-201ENST00000586015 570 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AP001330.4-201ENST00000604350 154 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AL139286.1-201ENST00000604465 483 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC007038.2-201ENST00000608095 740 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC108747.1-201ENST00000609508 535 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 MIR486-1-201ENST00000612171 68 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC026368.1-201ENST00000614934 690 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC019226.1-201ENST00000625666 515 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC010149.2-201ENST00000637608 315 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NKX2-2O95096 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 GABPAP-201ENST00000419271 1356 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RNU6-76P-201ENST00000384060 104 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 RNU6-432P-201ENST00000384196 109 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RPL23AP48-201ENST00000406913 488 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-2O95096 VN1R108P-201ENST00000431580 830 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RPL17P49-201ENST00000443728 411 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 PDSS1P2-201ENST00000449397 678 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AL121877.1-201ENST00000453704 622 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RPL7P15-201ENST00000461190 712 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 RPL21P104-201ENST00000464143 478 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 ACTR3P3-201ENST00000480448 893 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 NIPA2P2-201ENST00000496376 1083 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 VN1R104P-201ENST00000505115 1009 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 ARL2BPP4-201ENST00000506854 471 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 RAC1P2-201ENST00000511164 579 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RN7SKP289-201ENST00000517244 295 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 OR8R1P-201ENST00000543943 764 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AL157394.1-201ENST00000562983 1224 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC053481.4-201ENST00000583164 216 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 RNU6-87P-201ENST00000607561 108 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AL391813.2-201ENST00000609113 322 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 BX664608.1-201ENST00000610519 487 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC131902.3-201ENST00000611767 581 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC008121.2-201ENST00000614647 523 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 MIR6875-201ENST00000617506 72 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC009509.4-201ENST00000619202 509 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 DDX10P1-201ENST00000448545 1933 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-2O95096 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-2O95096 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-2O95096 TEX21P-201ENST00000447107 1476 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 AC095050.2-201ENST00000510748 1458 ntBASIC3.54□□□□□ -1.84
NKX2-2O95096 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms