Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
USH2AO75445 CKAP2P1-201ENST00000555477 2049 ntBASIC0.84□□□□□ -2.27
USH2AO75445 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
USH2AO75445 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
USH2AO75445 RNA5SP331-201ENST00000364986 107 ntBASIC0.84□□□□□ -2.27
USH2AO75445 RN7SKP123-201ENST00000410732 291 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AL136133.1-201ENST00000413694 376 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC0.84□□□□□ -2.27
USH2AO75445 AC018630.2-202ENST00000422992 927 ntBASIC0.84□□□□□ -2.27
USH2AO75445 RPL21P71-201ENST00000465598 459 ntBASIC0.84□□□□□ -2.27
USH2AO75445 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.84□□□□□ -2.27
USH2AO75445 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.84□□□□□ -2.27
USH2AO75445 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC0.84□□□□□ -2.27
USH2AO75445 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.84□□□□□ -2.27
USH2AO75445 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
USH2AO75445 CR383656.8-201ENST00000549046 145 ntBASIC0.84□□□□□ -2.27
USH2AO75445 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC0.84□□□□□ -2.27
USH2AO75445 AC008133.2-201ENST00000624540 351 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AC007342.9-201ENST00000623877 1385 ntBASIC0.84□□□□□ -2.27
USH2AO75445 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
USH2AO75445 RPL21P3-201ENST00000395517 478 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AC019129.1-201ENST00000403786 261 ntBASIC0.84□□□□□ -2.28
USH2AO75445 RNU2-20P-201ENST00000410425 191 ntBASIC0.84□□□□□ -2.28
USH2AO75445 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.84□□□□□ -2.28
USH2AO75445 RNU7-170P-201ENST00000459303 61 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
USH2AO75445 CBX3P4-201ENST00000538909 354 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC0.84□□□□□ -2.28
USH2AO75445 AC090970.3-201ENST00000612566 866 ntBASIC0.84□□□□□ -2.28
USH2AO75445 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC0.84□□□□□ -2.28
USH2AO75445 AC093311.1-201ENST00000506586 2021 ntBASIC0.84□□□□□ -2.28
USH2AO75445 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC0.84□□□□□ -2.28
USH2AO75445 HMGB3P2-201ENST00000411913 584 ntBASIC0.84□□□□□ -2.28
USH2AO75445 RAD23BP2-201ENST00000416003 1207 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.84□□□□□ -2.28
USH2AO75445 AL513175.2-201ENST00000422071 443 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.84□□□□□ -2.28
USH2AO75445 AIG1P1-201ENST00000503376 148 ntBASIC0.84□□□□□ -2.28
USH2AO75445 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.84□□□□□ -2.28
USH2AO75445 FRG1DP-201ENST00000635586 771 ntBASIC0.84□□□□□ -2.28
USH2AO75445 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.84□□□□□ -2.28
USH2AO75445 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USH2AO75445 SET-203ENST00000372688 801 ntTSL 2 BASIC0.83□□□□□ -2.28
USH2AO75445 RPL23AP48-201ENST00000406913 488 ntBASIC0.83□□□□□ -2.28
USH2AO75445 EIF1AXP1-201ENST00000419267 435 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC0.83□□□□□ -2.28
USH2AO75445 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.83□□□□□ -2.28
USH2AO75445 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.83□□□□□ -2.28
USH2AO75445 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC0.83□□□□□ -2.28
USH2AO75445 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC0.83□□□□□ -2.28
USH2AO75445 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.83□□□□□ -2.28
USH2AO75445 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
USH2AO75445 AC073869.7-201ENST00000640874 297 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC123912.3-201ENST00000600907 1367 ntBASIC0.83□□□□□ -2.28
USH2AO75445 Y_RNA.390-201ENST00000383932 102 ntBASIC0.83□□□□□ -2.28
USH2AO75445 MIR1294-201ENST00000408503 142 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 FAM106DP-201ENST00000586416 501 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC120053.1-201ENST00000607706 736 ntBASIC0.83□□□□□ -2.28
USH2AO75445 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC0.83□□□□□ -2.28
USH2AO75445 ANKRD62P1-201ENST00000434304 1623 ntBASIC0.83□□□□□ -2.28
USH2AO75445 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC0.83□□□□□ -2.28
USH2AO75445 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.83□□□□□ -2.28
USH2AO75445 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
USH2AO75445 AC008173.1-201ENST00000418901 264 ntBASIC0.83□□□□□ -2.28
USH2AO75445 IPMKP1-201ENST00000425988 855 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC0.83□□□□□ -2.28
USH2AO75445 TXNP6-201ENST00000510190 310 ntBASIC0.83□□□□□ -2.28
USH2AO75445 LRRC34P2-201ENST00000514850 553 ntBASIC0.83□□□□□ -2.28
USH2AO75445 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC0.83□□□□□ -2.28
USH2AO75445 AC090229.1-201ENST00000590983 1609 ntBASIC0.83□□□□□ -2.28
USH2AO75445 RNU1-87P-201ENST00000363727 170 ntBASIC0.83□□□□□ -2.28
USH2AO75445 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 DUXAP8-207ENST00000456786 622 ntBASIC0.83□□□□□ -2.28
USH2AO75445 CREM-226ENST00000469949 721 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 RPL23AP55-201ENST00000498163 452 ntBASIC0.83□□□□□ -2.28
USH2AO75445 RNA5SP330-201ENST00000517096 96 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.83□□□□□ -2.28
USH2AO75445 AC103810.1-201ENST00000579873 453 ntBASIC0.83□□□□□ -2.28
USH2AO75445 AC022960.2-201ENST00000616300 666 ntBASIC0.83□□□□□ -2.28
USH2AO75445 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
USH2AO75445 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC0.83□□□□□ -2.28
USH2AO75445 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USH2AO75445 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC0.82□□□□□ -2.28
USH2AO75445 AC234781.2-201ENST00000426370 994 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.82□□□□□ -2.28
USH2AO75445 AL356280.1-201ENST00000603614 379 ntBASIC0.82□□□□□ -2.28
USH2AO75445 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC0.82□□□□□ -2.28
USH2AO75445 AL365400.1-201ENST00000431854 640 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AL121877.1-201ENST00000453704 622 ntBASIC0.82□□□□□ -2.28
USH2AO75445 RPL23AP14-201ENST00000468281 468 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 MTCYBP17-201ENST00000503579 789 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms