Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 HSPA8P17-201ENST00000427029 1382 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN1O15353 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
FOXN1O15353 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
FOXN1O15353 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN1O15353 SNORA38.1-201ENST00000364172 131 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 RNU6-483P-201ENST00000384088 108 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 MIR1179-201ENST00000408703 91 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 RN7SKP222-201ENST00000410651 315 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN1O15353 RPS27AP14-201ENST00000422868 454 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AL358934.1-201ENST00000432346 324 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 RPL21P23-201ENST00000446654 460 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXN1O15353 USP9YP12-201ENST00000450481 570 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN1O15353 AL133162.1-201ENST00000463228 453 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXN1O15353 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN1O15353 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXN1O15353 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN1O15353 ARL2BPP5-201ENST00000523141 481 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC008083.2-201ENST00000546707 476 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AL358913.1-201ENST00000554342 121 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AL157394.1-201ENST00000562983 1224 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC012182.1-201ENST00000570133 895 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 MIR5697-201ENST00000578045 78 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 LARP7P3-201ENST00000579888 337 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC012493.2-201ENST00000595083 291 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AL596327.1-201ENST00000603629 213 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AL035413.2-201ENST00000604801 525 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN1O15353 AC092650.2-201ENST00000619984 902 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC006386.2-201ENST00000624491 75 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC012005.1-201ENST00000624575 75 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 AC093591.3-201ENST00000634516 308 ntBASIC4.66□□□□□ -1.66
FOXN1O15353 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN1O15353 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN1O15353 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN1O15353 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXN1O15353 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXN1O15353 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXN1O15353 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN1O15353 MIR448-201ENST00000362131 111 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 Y_RNA.97-201ENST00000363094 102 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN1O15353 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN1O15353 AMD1P2-201ENST00000412936 992 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 HMGB1P11-201ENST00000413899 637 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 FCF1P2-201ENST00000415284 583 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 RPS3AP9-201ENST00000417027 792 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 BX295541.1-201ENST00000417774 250 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AL139247.1-201ENST00000422768 325 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AL513185.2-201ENST00000425543 193 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 RAD23BP3-201ENST00000454157 1152 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN1O15353 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN1O15353 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN1O15353 AC114981.1-201ENST00000503897 678 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN1O15353 AC022447.3-201ENST00000506865 495 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 HIGD1AP3-201ENST00000515857 278 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 HPRT1P3-201ENST00000539521 576 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 CBX3P5-201ENST00000552017 521 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 MIR3945-201ENST00000581853 98 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AC010928.3-201ENST00000587712 541 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXN1O15353 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN1O15353 LLPHP1-201ENST00000603571 367 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 YPEL5P2-201ENST00000605553 359 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.65□□□□□ -1.67
FOXN1O15353 AC005332.6-201ENST00000613178 446 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 AC108479.2-201ENST00000617314 601 ntBASIC4.65□□□□□ -1.67
FOXN1O15353 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
FOXN1O15353 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXN1O15353 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN1O15353 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
FOXN1O15353 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN1O15353 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN1O15353 ZNF37BP-203ENST00000452306 1352 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms