Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU2-43P-201ENST00000410306 190 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 RN7SKP53-201ENST00000411337 315 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 AL353678.1-201ENST00000422735 741 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.34□□□□□ -1.71
NPHP1O15259 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
NPHP1O15259 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 OR6K5P-201ENST00000447050 945 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.34□□□□□ -1.71
NPHP1O15259 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 AC147055.4-201ENST00000504399 745 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 APOOP4-201ENST00000513530 597 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 RNU1-61P-201ENST00000516107 151 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.34□□□□□ -1.71
NPHP1O15259 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.34□□□□□ -1.71
NPHP1O15259 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.34□□□□□ -1.71
NPHP1O15259 AL137843.1-201ENST00000605078 385 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AC090186.1-201ENST00000605991 572 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AC002550.2-201ENST00000621246 394 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 MIR6852-201ENST00000621699 66 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.34□□□□□ -1.71
NPHP1O15259 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPHP1O15259 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPHP1O15259 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPHP1O15259 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPHP1O15259 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPHP1O15259 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPHP1O15259 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPHP1O15259 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC009812.4-201ENST00000569134 1805 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC087359.1-201ENST00000508335 1740 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 RNU6-462P-201ENST00000362659 105 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 RNU6-359P-201ENST00000365466 108 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 UBA52P6-201ENST00000399822 382 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 MTND4P13-201ENST00000402078 1023 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 RNU4-65P-201ENST00000410473 140 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.33□□□□□ -1.72
NPHP1O15259 COTL1P1-201ENST00000422309 375 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC104563.1-201ENST00000476147 376 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC110794.1-201ENST00000505816 425 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPHP1O15259 PHBP14-201ENST00000512887 367 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 RNA5SP216-201ENST00000516111 123 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 RNU6-528P-201ENST00000516926 100 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC239860.2-201ENST00000525886 270 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 AL451007.1-201ENST00000595491 289 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC106028.5-201ENST00000610332 395 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AC006386.2-201ENST00000624491 75 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.33□□□□□ -1.72
NPHP1O15259 AC012005.1-201ENST00000624575 75 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.33□□□□□ -1.72
NPHP1O15259 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPHP1O15259 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPHP1O15259 AC009487.2-201ENST00000420969 6821 ntBASIC4.33□□□□□ -1.72
NPHP1O15259 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NPHP1O15259 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPHP1O15259 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.33□□□□□ -1.72
NPHP1O15259 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPHP1O15259 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
NPHP1O15259 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.32□□□□□ -1.72
NPHP1O15259 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPHP1O15259 RPS4XP5-202ENST00000449995 1334 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 Y_RNA.500-201ENST00000384466 111 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 RHEBP3-201ENST00000411920 351 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 AC083875.1-201ENST00000419509 405 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 ATP5HP2-201ENST00000433885 485 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 AL121871.1-201ENST00000443413 436 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 SNORD121B-201ENST00000458838 81 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 MTND2P14-201ENST00000482139 351 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.32□□□□□ -1.72
NPHP1O15259 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPHP1O15259 CBX3P3-201ENST00000508108 532 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NPHP1O15259 MTCYBP43-201ENST00000513621 740 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.32□□□□□ -1.72
NPHP1O15259 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.32□□□□□ -1.72
NPHP1O15259 UBTFL10-201ENST00000528532 562 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 AL391156.1-201ENST00000554965 554 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.32□□□□□ -1.72
NPHP1O15259 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.32□□□□□ -1.72
NPHP1O15259 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.32□□□□□ -1.72
NPHP1O15259 AL031281.1-201ENST00000604049 488 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 AC013244.3-201ENST00000605614 388 ntBASIC4.32□□□□□ -1.72
NPHP1O15259 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms