Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.29□□□□□ -1.88
E2F3O00716 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.29□□□□□ -1.88
E2F3O00716 AC006557.5-201ENST00000603126 811 ntBASIC3.29□□□□□ -1.88
E2F3O00716 DUXAP3-201ENST00000603616 594 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
E2F3O00716 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
E2F3O00716 AC097478.2-201ENST00000610572 514 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC092106.3-201ENST00000611308 722 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC107075.1-201ENST00000613695 314 ntBASIC3.29□□□□□ -1.88
E2F3O00716 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
E2F3O00716 AC109809.1-201ENST00000619665 545 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC006111.3-201ENST00000622137 383 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.29□□□□□ -1.88
E2F3O00716 AC097520.1-201ENST00000624435 385 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC127502.3-201ENST00000636170 1206 ntBASIC3.29□□□□□ -1.88
E2F3O00716 AC006927.4-201ENST00000639187 543 ntBASIC3.29□□□□□ -1.88
E2F3O00716 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
E2F3O00716 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
E2F3O00716 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
E2F3O00716 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
E2F3O00716 RNU5D-1-201ENST00000363299 116 ntBASIC3.28□□□□□ -1.88
E2F3O00716 Y_RNA.192-201ENST00000363977 102 ntBASIC3.28□□□□□ -1.88
E2F3O00716 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
E2F3O00716 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
E2F3O00716 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
E2F3O00716 U3.42-201ENST00000408746 214 ntBASIC3.28□□□□□ -1.88
E2F3O00716 RPS15AP38-201ENST00000413110 372 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 AC010099.3-201ENST00000423896 409 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
E2F3O00716 MTCO1P39-201ENST00000426148 480 ntBASIC3.28□□□□□ -1.88
E2F3O00716 MTATP6P4-201ENST00000427725 675 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC005300.1-201ENST00000428401 373 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.28□□□□□ -1.88
E2F3O00716 COX7BP2-201ENST00000437976 242 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
E2F3O00716 FGF7P5-201ENST00000441829 291 ntBASIC3.28□□□□□ -1.88
E2F3O00716 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F3O00716 MTCO2P25-201ENST00000447065 681 ntBASIC3.28□□□□□ -1.88
E2F3O00716 VN1R10P-201ENST00000447106 875 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC140076.1-201ENST00000449897 361 ntBASIC3.28□□□□□ -1.88
E2F3O00716 RNA5SP310-201ENST00000459084 116 ntBASIC3.28□□□□□ -1.88
E2F3O00716 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.28□□□□□ -1.88
E2F3O00716 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 AC116353.3-201ENST00000511215 249 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC010625.1-201ENST00000511296 403 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F3O00716 AC112673.1-201ENST00000513168 575 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 AC026407.1-201ENST00000518369 204 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F3O00716 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
E2F3O00716 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.28□□□□□ -1.88
E2F3O00716 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
E2F3O00716 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
E2F3O00716 AC005476.1-201ENST00000554427 397 ntBASIC3.28□□□□□ -1.88
E2F3O00716 NCAPGP2-201ENST00000557911 754 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.28□□□□□ -1.88
E2F3O00716 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F3O00716 RPL23AP92-201ENST00000603609 255 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC107952.2-201ENST00000606048 486 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC023158.2-201ENST00000614876 543 ntBASIC3.28□□□□□ -1.88
E2F3O00716 AC021755.4-201ENST00000616620 456 ntBASIC3.28□□□□□ -1.88
E2F3O00716 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F3O00716 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
E2F3O00716 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
E2F3O00716 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
E2F3O00716 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
E2F3O00716 AC107982.1-201ENST00000507171 1300 ntBASIC3.27□□□□□ -1.89
E2F3O00716 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
E2F3O00716 MIR128-1-201ENST00000384921 82 ntBASIC3.27□□□□□ -1.89
E2F3O00716 TAS2R15P-201ENST00000390674 928 ntBASIC3.27□□□□□ -1.89
E2F3O00716 SNORA48.2-201ENST00000390926 124 ntBASIC3.27□□□□□ -1.89
E2F3O00716 RNA5SP80-201ENST00000410475 111 ntBASIC3.27□□□□□ -1.89
E2F3O00716 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
E2F3O00716 AL008987.1-201ENST00000415528 237 ntBASIC3.27□□□□□ -1.89
E2F3O00716 MRPL50P2-201ENST00000416821 482 ntBASIC3.27□□□□□ -1.89
E2F3O00716 ELOCP9-201ENST00000418624 239 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 USP9YP36-201ENST00000424581 829 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AC005019.1-201ENST00000436455 431 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.27□□□□□ -1.89
E2F3O00716 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.27□□□□□ -1.89
E2F3O00716 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.27□□□□□ -1.89
E2F3O00716 RN7SL807P-201ENST00000470923 297 ntBASIC3.27□□□□□ -1.89
E2F3O00716 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
E2F3O00716 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 OR4G11P-201ENST00000492842 939 ntBASIC3.27□□□□□ -1.89
E2F3O00716 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.27□□□□□ -1.89
E2F3O00716 CBX3P3-201ENST00000508108 532 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms