Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN4O00479 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGN4O00479 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGN4O00479 RPP40P2-201ENST00000603596 712 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 APOOP1-201ENST00000604695 592 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AC140725.3-201ENST00000616193 880 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN4O00479 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGN4O00479 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMGN4O00479 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN4O00479 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN4O00479 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN4O00479 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN4O00479 RN7SKP226-201ENST00000364912 300 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN4O00479 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGN4O00479 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN4O00479 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGN4O00479 AL031663.1-201ENST00000437445 219 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN4O00479 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 ELOCP13-201ENST00000443934 329 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 MTND2P8-201ENST00000450555 1025 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC010301.1-201ENST00000473936 355 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGN4O00479 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.69□□□□□ -2.14
HMGN4O00479 IGKV2-36-201ENST00000519999 223 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.69□□□□□ -2.14
HMGN4O00479 MIR5694-201ENST00000581190 76 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
HMGN4O00479 AC068790.3-201ENST00000602988 553 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AL161734.1-201ENST00000609720 557 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC055764.2-201ENST00000610089 670 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 AC008083.4-201ENST00000615076 444 ntBASIC1.69□□□□□ -2.14
HMGN4O00479 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN4O00479 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGN4O00479 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HMGN4O00479 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGN4O00479 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN4O00479 RNA5SP391-201ENST00000363456 119 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 RNU6-1181P-201ENST00000384191 106 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 CYCSP45-201ENST00000402289 315 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 GSTA9P-201ENST00000406231 611 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 MORF4L1P7-201ENST00000426038 703 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.68□□□□□ -2.14
HMGN4O00479 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 PSMA2P3-201ENST00000429685 675 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 USP9YP15-201ENST00000442391 422 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGN4O00479 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 DNAJC19P8-201ENST00000452887 259 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 CDC42P4-201ENST00000510507 563 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN4O00479 AC008083.2-201ENST00000546707 476 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC007375.1-201ENST00000554513 578 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN4O00479 AC090312.2-201ENST00000582687 378 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC115085.1-201ENST00000588924 229 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC009220.3-201ENST00000604318 586 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 MIR6864-201ENST00000617935 70 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC103798.2-201ENST00000624292 632 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 AC110994.2-201ENST00000635481 492 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN4O00479 KPNA2P1-201ENST00000458289 1591 ntBASIC1.68□□□□□ -2.14
HMGN4O00479 PABPC1P9-201ENST00000426076 1612 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
HMGN4O00479 U8.2-201ENST00000363156 134 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HMGN4O00479 HNRNPDP2-201ENST00000406475 478 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC092447.6-201ENST00000414578 210 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN4O00479 SUMO1P4-201ENST00000429430 302 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGN4O00479 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AL451074.3-201ENST00000437709 472 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 XKRY2-201ENST00000442362 1093 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 RPS24P6-201ENST00000452670 400 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN4O00479 AP002345.1-201ENST00000456493 928 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN4O00479 GAPDHP39-201ENST00000481866 979 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 MTND3P6-201ENST00000485242 339 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN4O00479 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 AP004371.1-201ENST00000525240 214 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC022690.1-201ENST00000526681 550 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 AP003385.6-201ENST00000531603 374 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 ATP5F1P7-201ENST00000567330 760 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms