Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.45□□□□□ -2.02
UPK1AO00322 AC126182.1-201ENST00000478134 357 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC006390.1-201ENST00000508068 283 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 COL6A4P2-205ENST00000509855 506 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC121161.1-201ENST00000510606 652 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC034159.1-201ENST00000513885 583 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.45□□□□□ -2.02
UPK1AO00322 COX6CP8-201ENST00000522620 226 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AP003102.1-201ENST00000525638 661 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.45□□□□□ -2.02
UPK1AO00322 EIF4BP1-201ENST00000554881 351 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 FAM60BP-201ENST00000578364 658 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 BDH2P1-201ENST00000602288 736 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC106028.5-201ENST00000610332 395 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 VN1R74P-201ENST00000613259 503 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AL512506.2-201ENST00000624472 458 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.45□□□□□ -2.02
UPK1AO00322 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.45□□□□□ -2.02
UPK1AO00322 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.45□□□□□ -2.02
UPK1AO00322 AL121594.5-201ENST00000631724 573 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC090897.3-201ENST00000636973 1157 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPK1AO00322 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UPK1AO00322 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
UPK1AO00322 CUL1P1-201ENST00000509510 2425 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
UPK1AO00322 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UPK1AO00322 FRG1BP-201ENST00000278882 761 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UPK1AO00322 RNU6-582P-201ENST00000362989 107 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNU6-173P-201ENST00000364215 104 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNU6-353P-201ENST00000364266 108 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNU6-549P-201ENST00000384433 107 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 ATG3P1-201ENST00000419507 911 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 COTL1P1-201ENST00000422309 375 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
UPK1AO00322 UBE2D3P2-201ENST00000424409 445 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.44□□□□□ -2.02
UPK1AO00322 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC012497.1-201ENST00000429392 575 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC025750.2-201ENST00000442609 450 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AL050341.1-201ENST00000447743 313 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UPK1AO00322 RPL32P14-201ENST00000463196 378 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC104472.2-201ENST00000469035 601 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC015908.1-201ENST00000478739 476 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC026801.2-201ENST00000515352 425 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNA5SP282-201ENST00000516355 108 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNU6-885P-201ENST00000516607 104 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 RNA5SP135-201ENST00000517019 125 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.44□□□□□ -2.02
UPK1AO00322 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 EEF1B2P4-201ENST00000551398 348 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.44□□□□□ -2.02
UPK1AO00322 GTF3AP2-201ENST00000557014 266 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC009220.3-201ENST00000604318 586 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC010738.1-201ENST00000604970 987 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC007619.2-201ENST00000605743 379 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
UPK1AO00322 AC006386.2-201ENST00000624491 75 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 AC012005.1-201ENST00000624575 75 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 AC092435.3-201ENST00000565538 3654 ntBASIC2.44□□□□□ -2.02
UPK1AO00322 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.44□□□□□ -2.02
UPK1AO00322 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.44□□□□□ -2.02
UPK1AO00322 GDI2P1-201ENST00000429312 1336 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 DBF4P1-201ENST00000412976 1892 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 SNORA80A-201ENST00000363922 136 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 U8.8-201ENST00000365399 135 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 SNORD116-23-201ENST00000384645 92 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 CYCSP45-201ENST00000402289 315 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 FAT1P1-201ENST00000406588 507 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 PTGES3P2-201ENST00000407942 482 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 HMGN2P35-201ENST00000412164 270 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC092447.6-201ENST00000414578 210 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 FCF1P2-201ENST00000415284 583 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.43□□□□□ -2.02
UPK1AO00322 RPLP0P7-201ENST00000416050 667 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 USP9YP20-201ENST00000419224 558 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 SFR1P2-201ENST00000421841 730 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 MTATP6P4-201ENST00000427725 675 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms